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Method, primer pair and kit for identifying color of watermelon pulp and application thereof

A primer pair, watermelon technology, applied in the directions of biochemical equipment and methods, microbial determination/inspection, DNA/RNA fragments, etc., to achieve the effect of improving efficiency and accuracy, easy to observe, and easy to operate

Active Publication Date: 2021-07-23
NORTHEAST AGRICULTURAL UNIVERSITY
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, the key genes (or loci) that regulate the formation of watermelon orange pulp traits have not been reported in forward genetics. Therefore, according to the sequence differences in the segment where the orange pulp gene is located, it is still necessary to develop molecules that are closely linked to it. Main Technical Difficulties in Molecular Marker-Assisted Screening of Watermelon Pulp Color

Method used

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  • Method, primer pair and kit for identifying color of watermelon pulp and application thereof
  • Method, primer pair and kit for identifying color of watermelon pulp and application thereof
  • Method, primer pair and kit for identifying color of watermelon pulp and application thereof

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0039] Embodiment 1: The acquisition method of specific identification flesh color primer

[0040] (1) Acquisition of experimental materials

[0041] Select the garden female parent whose mature fruit has red pulp traits, cultivated watermelon as the male parent, select Yellow Crimson with orange pulp traits, and cultivated watermelon as the female parent, and cross the above male and female parents to obtain F 1 generation; then for the above obtained F 1 F 2 Generation groups, with F 1 Generation and F 2 The generation group was used as the test material.

[0042] Sow the materials of each generation in step (1) separately, harvest the fruit at the mature stage, cut the fruit crosswise, and judge the color of the pulp by observation. Each color observation is checked by three people separately to ensure the accuracy of the investigation results. f 1 Generation and F 2 The survey results of the pulp color of each individual plant in the generation group showed that: F ...

Embodiment 2

[0047] Embodiment 2: A kind of method for identifying the character of watermelon orange pulp

[0048] (1) extract the genomic DNA of the watermelon to be tested;

[0049] (2) Using the genomic DNA obtained in step (1) as a template, using the primer pair to perform PCR amplification to obtain a PCR product;

[0050] (3) The PCR product obtained in step (2) is digested with restriction endonuclease TaqI to obtain a digested product;

[0051] (4) Judging the pulp color of the watermelon by detecting the enzyme cleavage product.

[0052] The specific judgment method is: use agarose gel electrophoresis to detect the enzyme-cut products. If there are two enzyme-cleaved products, it is judged that the watermelon has orange pulp properties; if there are one or more enzyme-cleaved products, it is judged that the watermelon has red pulp properties.

[0053] The above PCR reaction system is: 1 μL of upstream and downstream primers (primer concentration is 2 pM), DNA template 2 μL (co...

Embodiment 3

[0057] Example 3: Utilize the obtained primers to screen watermelon varieties with different flesh colors

[0058] For judging the accuracy of the developed primer pair identification watermelon orange pulp, select 24 F described in embodiment 1 2 Substitute the sample of watermelon seedling, carry out pulp color identification to each sample according to the identification method described in embodiment 2, identification result is as follows image 3 As shown, the enzyme digestion products of samples 1-8 and 17-24 are one or three, so samples 1-8 and 17-24 are identified as watermelon seedlings with red pulp traits; the enzyme digestion products of samples 9-16 are two Therefore, samples 9-16 were identified as watermelon seedlings with orange pulp traits. Harvest F 2 Substitute fruit, cut the fruit crosswise, and judge the color of the pulp by observation. It has been verified that 24 F 2 The primer pair identification results of the generation samples were 100% consisten...

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Abstract

The invention discloses a method, primer pair and kit for identifying the color of the watermelon pulp and application thereof, and belongs to the technical field of molecular marker-assisted breeding. In order to improve the efficiency and the accuracy of watermelon pulp color identification, on the basis of a genetic law, technologies such as genome re-sequencing, BSA-seq and the like are utilized to obtain a chromosome segment closely linked with watermelon orange pulp characters, a primer capable of being used for identifying the watermelon orange pulp characters is developed in the segment, verification is performed in a genetic group, finally, the primer pair capable of accurately identifying the watermelon orange pulp is developed, the primer pair and the kit containing the primer pair can be applied to germplasm resource screening and watermelon molecular breeding, and important theoretical and practical significance for improving the breeding efficiency and accuracy is achieved.

Description

technical field [0001] The invention relates to a method for identifying the color of watermelon pulp, a pair of primers, a kit and applications thereof, and belongs to the technical field of molecular marker-assisted breeding. Background technique [0002] Watermelon (Citrullus lanatus) is an important economic crop of Cucurbitaceae, which is widely planted in my country and the world. According to the statistics of the Food and Agriculture Organization of the United Nations, the annual output and cultivated area of ​​watermelon in my country rank first in the world. The color of watermelon pulp has very rich variations (dark red, red, pink, orange, bright yellow, light yellow, white, and some wild species have light green pulp), which is an important indicator for breeding. Carotenoids are the main pigments that form the color of watermelon pulp, which are fat-soluble terpenoids. Lycopene is the main pigment in red and pink pulps; β-carotene or pro-lycopene is the main pig...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6895C12Q1/686C12N15/11
CPCC12Q1/6895C12Q1/686C12Q2600/13C12Q2521/301C12Q2565/125
Inventor 栾非时刘识高鹏刘树森戴祖云张其安王学征刘宏宇刘钊杨中周朱子成栾雨时
Owner NORTHEAST AGRICULTURAL UNIVERSITY