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Loop-mediated isothermal amplification detection primer groups of Escherichia coli 0157, detection method and reagent kit

A loop-mediated isothermal, detection kit technology, applied in biochemical equipment and methods, microbial assay/inspection, recombinant DNA technology, etc. Achieve the effect of short detection time, high sensitivity and simple operation process

Active Publication Date: 2013-02-27
GUANGDONG INST OF MICROBIOLOGY GUANGDONG DETECTION CENT OF MICROBIOLOGY +1
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0004] In recent years, molecular detection methods for E. coli O157 such as PCR and LAMP methods have been gradually established. These methods have high specificity and sensitivity, but due to the complexity of food types, the interference of finished samples and background microorganisms on E. coli O157 is relatively large. In addition, E.coli O157 is greatly affected by factors such as culture temperature, salinity, pH value and various components of the medium. Therefore, there is no complete, efficient and sensitive method among the current methods. The detection method is applicable to samples from all sources including (food, water, soil and clinical samples)
In addition, recent studies have found that the improved EC broth has a certain impact on the recovery and growth of the target bacteria E.coli O157 due to the high content of antibacterial agents such as bile salts and novobiocin, resulting in some complex matrix samples. .coli O157 cannot be checked out

Method used

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  • Loop-mediated isothermal amplification detection primer groups of Escherichia coli 0157, detection method and reagent kit

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0040] Example 1: Detection of Escherichia coli 0157 in artificially contaminated beef

[0041] 1. Sample processing

[0042] The standard strain E.coli O157:H7NCTC12900 was revived in LB broth for 18h, and 1mL of the bacterial solution was diluted 10 times with sterile saline, and 10 -6 、10 -7 、10 -8 Plate counting was carried out at three dilutions, the concentrations were 4×10 2 , 4×10 1 and 4×10 0 cfu / mL; take 10 -8 Concentration of 1ml of bacterial solution was added to 25g of beef samples not containing E.coli O157:H7, mixed for 1h for artificial contamination.

[0043] 2. Sample enrichment

[0044] Add the above 25g of artificially contaminated beef samples into 225mL of vancomycin-buffered peptone water, incubate at 42±1°C for 6 hours to obtain the enrichment solution, take 1mL of the enrichment solution into a 2mL sterilized centrifuge tube, add 20μL E.coli 0157 immunomagnetic beads were enriched for 10 min, washed 3 times with 100 μL PBS-Tween20, and bacteri...

Embodiment 2

[0051] Example 2: Detection of Escherichia coli 0157 in chilled fresh pork

[0052] 1. Sample enrichment

[0053] Add 25g of pork samples purchased in the market to 225mL of vancomycin-buffered peptone water, incubate at 42±1°C for 8 hours to obtain the enrichment solution, take 1mL of the enrichment solution into a 2mL sterilized centrifuge tube, add 20μL E.coli 0157 immunomagnetic beads were enriched for 10 min, washed 3 times with 100 μL PBS-Tween20, and bacterial DNA was extracted.

[0054] 2. Bacterial DNA extraction

[0055] Take 1mL of the bacterial culture enriched by magnetic beads, centrifuge at 10,000rpm for 3min, discard the supernatant, add 50μLTE to the precipitate, suspend and mix well, put it in a water bath at 100°C for 10min, cool on ice for 3min, centrifuge at 12000r / min for 10min, and take the supernatant as the bacteria DNA, spare.

[0056] 3. LAMP amplification

[0057] 25 μL loop-mediated isothermal amplification reaction system: including 2.5 μL 10...

Embodiment 3

[0060] Example 3: Detection of Escherichia coli 0157 in chilled fresh beef

[0061] 1. Sample enrichment

[0062] Add 25g of beef samples purchased in the market to 225mL of vancomycin-buffered peptone water, incubate at 42±1°C for 8 hours to obtain the enrichment solution, take 1mL of the enrichment solution into a 2mL sterilized centrifuge tube, add 20μL E.coli 0157 immunomagnetic beads were enriched for 10 min, washed 3 times with 100 μL PBS-Tween20, and bacterial DNA was extracted.

[0063] 2. Bacterial DNA extraction

[0064] Take 1mL of the bacterial culture enriched by magnetic beads, centrifuge at 10,000rpm for 3min, discard the supernatant, add 50μLTE to the precipitate, suspend and mix well, put it in a water bath at 100°C for 10min, cool on ice for 3min, centrifuge at 12000r / min for 10min, and take the supernatant as the bacteria DNA, spare.

[0065] 3. LAMP amplification

[0066] 25 μL loop-mediated isothermal amplification reaction system: including 2.5 μL 10...

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Abstract

The invention discloses loop-mediated isothermal amplification detection primer groups of Escherichia coli 0157, a detection method and a reagent kit. A set of specific detection primer groups, the detection reagent kit containing detection primer groups, the method using the detection reagent kit for detection through loop-mediated isothermal amplification and the detection method for determining whether the Escherichia coli 0157 exists in a sample to be tested are designed and screened for rfbE genes of the Escherichia coli 0157. The detection reagent kit and the detection method have the advantages that the sensitivity is high, the specificity is high, the accuracy rate reaches 99% and the detection time is short, only 8-10 hours are spent from sample treatment to result reporting, no polymerase chain reaction instrument or electrophoresis apparatus is required, the operating process is simple, the problems that traditional detection methods are long in consumed time, traditional cultural methods are low in sensitivity, cross reaction exists during serum agglutination and the like are solved, the detection reagent kit and the detection method are significant to timely and effective handling of food-borne sudden public health events, and the detection reagent kit and the detection method are particularly applicable to self-checking of basic level detection mechanisms and food processing enterprises.

Description

Technical field: [0001] The invention belongs to the field of biotechnology, and in particular relates to a detection primer set, a detection method and a kit for a loop-mediated isothermal amplification detection of Escherichia coli O157. Background technique: [0002] Escherichia coli O157 (Escherichia coli O157) is a type of diarrhea-causing Escherichia coli that can cause severe food poisoning, and Escherichia coli O157:H7 is the main serotype of hemorrhagic Escherichia coli. Since 1982, E.coli O157:H7 has successively caused outbreaks and epidemics in the United States, Britain, Canada, Japan and other countries. The pathogen is an important pathogen that causes diarrhea and hemorrhagic enteritis, and 2% to 7% of patients will develop hemorrhagic nephrotic syndrome, and its infection has become a worldwide problem. In addition to E.coli O157:H7, Escherichia coli O157:NM (nonmobile), which produces Shiga toxin and can ferment sorbitol, has become an important pathogen i...

Claims

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Application Information

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IPC IPC(8): C12Q1/68C12Q1/10C12N15/11
Inventor 张淑红吴清平张菊梅赖则冰李海刚
Owner GUANGDONG INST OF MICROBIOLOGY GUANGDONG DETECTION CENT OF MICROBIOLOGY
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