RNAi fragment, RNAi vector, preparation method and application of RNAi vector
A technology that interferes with vectors and fragments. It is applied in DNA/RNA fragments, recombinant DNA technology, and the introduction of foreign genetic material using vectors. It can solve the problems of expensive equipment, slow separation speed, and poor vitality, and achieve low-cost effects.
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Embodiment 1
[0034] Design and synthesis of RNAi interference fragments for interference with Zfy gene in animal testis germ cells. In the following example, the technical solution provided by the present invention will be described by taking the RNAi interference fragment of the Zfy gene in the spermatogenic cells of sheep testis as an example. details as follows:
[0035]According to the mRNA sequence of sheep Zfy gene, 8 siRNA fragment templates were designed and two siRNA fragments were screened out, of which Table 1 is the ZfycDNA template used for siRNA;
[0036] Table 1 ZfycDNA template for siRNA
[0037]
[0038]
[0039] Then, according to the requirements of the pLentiLox3.7 vector and its promoter, two pairs of shRNAi oligonucleotide sequences were synthesized. The two pairs of shRNAi interference fragments are shRNAA and shRNAG respectively, as table 2 shown.
[0040] The Zfy gene sequence used was from the NCBI gene bank, and 8 siRNA fragments were screened out ...
Embodiment 2
[0044] The screening method of two pairs of shRNAi interference fragments described in embodiment 1 is specifically as follows:
[0045] 1. Construct the RNAi interference vector of Zfy gene:
[0046] The Zfy gene sequence used was from the NCBI gene bank, and 8 siRNA fragments were screened out according to the RNAi design principles and the comparison analysis results on NCBI, as table 1 Shown is the ZfycDNA template used for siRNA. Add XholI and HpaI restriction sites to the 5' and 3' of each siRNA fragment, respectively, and then send the siRNA fragment to be synthesized by a biological company. The positive and antisense strands were combined into double strands by annealing to the plentilox3.7 (Addgene, USA) lentiviral packaging system vector, and then transformed into E.coliDH5α competent cells (Tiangen, China) for amplification, and the plasmid was extracted- Store at 20°C.
[0047] 2. In vitro interference test of Zfy gene:
[0048] Select 2 testes of 1-year-old ...
Embodiment 3
[0064] An RNAi interference carrier, comprising a RNAi interference fragment whose sequence is shown in SEQ ID NO.1, and its preparation method comprises the following steps:
[0065] (1) Digest the pLentiLox3.7 vector;
[0066] (2) Ligate the RNAi interference fragment with the pLentiLox3.7 carrier after digestion to obtain a ligation product;
[0067] Wherein, the RNAi interference fragment sequence is SEQ ID NO.1;
[0068] (3) Transform the ligation product into competent cells, screen with the pLentiLox3.7 vector, restriction site and hairpin structure, and perform sequencing identification on the obtained bacterial liquid, and compare the sequencing results with the RNAi Amplify the bacteria solution with the same sequence of the interference fragment;
[0069] The enzyme cutting sites are HpaI and XholI; the hairpin structure sequence is SEQ ID NO.3;
[0070] (4) Extracting the RNAi interference carrier from the amplified bacterial liquid.
[0071] The vector constru...
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