Applications of echinococcus granulosus dihydrofolate reductase
A technology of Echinococcus granulosus and dihydrofolic acid, which is applied in the biological field, can solve the problems of inaccurate diagnosis of Echinococcus granulosus and high probability of cross-reaction, and achieves the effects of good diagnostic effect, high specificity and sensitivity
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Embodiment 1
[0043] Example 1: Extraction of total RNA from Echinococcus granulosus
[0044] Echinococcus granulosus cysts were obtained from naturally infected sheep livers. The samples were collected from Xining, Qinghai or Ganzi, Sichuan, and stored in liquid nitrogen.
[0045] Echinococcus granulosus preserved in liquid nitrogen was taken out, ground with a mortar, and then total RNA was extracted according to the instructions of Tiangen's animal tissue RNA extraction kit.
[0046] (1) Add 300 μL of lysate for every 10-20 mg of protocephalus, and grind with a grinding rod;
[0047] (2) Add Proteinase K (10 μL) and RNase-Free ddH2O (590 μL) to the homogenate, mix well and react for 15 minutes (56°C).
[0048] (3) Centrifuge for 5min (12,000rpm), transfer the supernatant to a clean tube; add 0.5 times the volume of supernatant to the tube with absolute ethanol, mix well and transfer to the adsorption column, centrifuge for 1min (12,000rpm) Discard the waste liquid.
[0049] (4) Add pr...
Embodiment 2
[0055] Example 2: Synthesis of first-strand cDNA
[0056] Using the extracted total RNA of Echinococcus granulosus as a template and Oligo dT(18) as a reverse transcription primer, operate according to the instructions of the reverse transcription kit from Thermo Company:
[0057] (1) Prepare the reaction mixture on ice
[0058] Oligo dT 18 1μL
[0059] Template RNA 1 μL
[0060] DEPC ddH 2 O 1 μL
[0061] (2) After incubation at 70°C (5min), transfer to ice to cool
[0062] (3) Add the following reactants in order on ice:
[0063] 5 reaction buffer 4μL
[0064] RNase inhibitor 1 μL
[0065] 10dNTP mix 2 μL
[0066] (4) Add RevertAid after incubation at 37°C (5min) TM Reverse transcriptase 1 μL.
[0067] (5) PCR program: 42°C, 1h; 70°C, 10min.
[0068] (6) Store the obtained cDNA at -80°C.
Embodiment 3
[0069] Embodiment 3: Amplification of Eg-DHFR gene
[0070] According to the gene sequence of Eg-DHFR (EgrG_000572400) published in GeneDB (http: / / www.genedb.org / Homepage / Egranulosus), primers were designed with Primer Premier 5.0 software:
[0071] Upstream: 5'-CGC GGATCC ATGGGGCTGAAGCGTCT-3' is underlined as BamH I
[0072] Downstream: 5'-CCG CTCGAG ATGATCATTAAGGGGATGCG-3' Underline Xho I
[0073] Amplification system (25 μL): DNA template 1 μL each, upstream and downstream primers 1 μL each, PCR Mixture 12.5 μL, sterilized double distilled water 9.5 μL.
[0074] Amplification conditions: pre-denaturation: 95°C for 5min; 38 cycles (denaturation: 95°C, 40s; annealing: 54°C, 45s; extension: 72°C, 45s); final extension: 72°C, 10min.
[0075] A band of about 576 bp was amplified using the cDNA of Echinococcus granulosus Protoscoleum as a template ( figure 1 ).
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