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Sample adding device for pyrosequencing

A technology of pyrosequencing and sample loading device, which is applied in biochemical cleaning devices, enzymology/microbiology devices, bioreactors/fermenters for specific purposes, etc. The problem of inflexible strand collection and high cost of DNA single strand separation can achieve the effect of facilitating aggregation and guidance, avoiding single product structure, and enriching structure and variety.

Active Publication Date: 2017-04-26
菲思特(上海)生物科技有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Generally, 24 (4*6) suction filter needles are used as a group. When using it, it is necessary to ensure that there are sufficient samples or reagents to ensure the normal operation of the workstation. Therefore, this method of collecting DNA single strands is very inflexible and can only be used A fixed amount is added to the workstation to work, and a large amount of loss occurs in the process of multiple suction filtration and transfer, which is very unfavorable for micro collection, and the suction filter needle group needs to work at the same time, which has a certain volume for each component of the workstation requirements, the entire workstation takes up a lot of space
The huge system makes the micro-separation column need to pipette back and forth repeatedly during the DNA single-strand separation operation. The operation is very cumbersome, not only the separation cycle is long, the efficiency is low, and the overall equipment price is relatively expensive, resulting in the high cost of DNA single-strand separation. It also needs to consume a lot of reagents and other resources, which is extremely uneconomical
In addition, the suction filter needle in this workstation is made of metal, which is expensive and is often reused after treatment, so it is easy to cause cross-contamination between residues, the reliability is not high, and it will affect the accuracy of separation and detection results. Certain interference and influence
And during the solution extraction process, some residual solution will stick to the wall, so that a certain amount of target DNA single strands cannot be adsorbed by the micro-separation column, resulting in a decrease in the proportion of obtained DNA single strands, affecting the separation rate and causing waste

Method used

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  • Sample adding device for pyrosequencing
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  • Sample adding device for pyrosequencing

Examples

Experimental program
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Effect test

Embodiment 1

[0092] Figure 1 to Figure 3 The first embodiment of the sample loading device for pyrosequencing of the present invention is shown. The sample loading device for pyrosequencing of the present invention can be used for pyrosequencing detection and analysis of DNA sequences, the DNA sequence to be sequenced is a target sequence, and pyrosequencing is performed after the target DNA sequence is amplified.

[0093] The sample loading device for pyrosequencing in this embodiment includes a DNA sequencing device and a control area, and the DNA sequencing device includes a sample area, a reaction area and a detection area. The sample area, reaction area and detection area are installed on the analysis table 6, and the sample area, reaction area and detection area are monitored and controlled by the control area. The whole analysis process is operated by manipulator.

[0094] Before performing pyrosequencing, it is necessary to amplify the DNA template with sequencing to achieve the...

Embodiment 2

[0145] Because a chain collected on the filter membrane 22 needs to be sucked out or poured out, such a collection method may cause a certain collection loss, so the inventor preferably arranges the filter column 21 as a double-head structure with two ends exchanged, and the filter membrane 22 is located on the non-end surface of the filter column 21. When collection is required, replace the two ends of the filter column 21 and use conventional methods, such as centrifugation, to elute all DNA single strands on the filter membrane 22 to reduce sample loss.

[0146] like Figure 5 As shown, the difference between this embodiment and embodiment 1 is that the filter column 21 in embodiment 2 is a hollow cylinder with a symmetrical structure up and down, and the filter membrane 22 is vertically located in the middle of the hollow cylinder, and the filter column 21 can be For replacement use, the inner diameter of the hollow cylinder is 4.5mm, and the diameter of the filter membran...

Embodiment 3

[0150] like Image 6 As shown, the difference between this embodiment and Example 1 is that the filter column 21 of the DNA single-strand separation device in Example 3 adopts a space truncated circular structure, and the filter membrane 22 is arranged on the common top surface of the two circular truncated filter columns 21 , the diameter of the top surface of the circular truncated filter column 21 is consistent with the diameter of the filter membrane 22, and the two sides of the filter membrane 22 are provided with a pressing mechanism (not shown in the figure), so that the fixed filter membrane 22 cannot be displaced. The side wall of the opening lower end of the frustum-shaped filter column is provided with a boss to ensure that it can be fixed on the boss of the collecting pipe 23 when the two ends are reversed.

[0151] The separation method using the separation device belonging to this embodiment is the same as the step described in embodiment 1, and the difference wi...

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Abstract

The invention provides a sample adding device for pyrosequencing. The sample adding device comprises a sample area and a reaction area; the sample area comprises a rotational separating disc, the separating disc comprises at least one DNA separating area, the separating area comprises a hollow filtering column with the inside provided with a filtering film, and DNA single chains connected with compatible connecting bodies and DNA single chains unconnected with compatible connecting bodies are filtered through the filtering film to be separated; the reaction area comprises a sample adding part and a sample trough, and the sample adding part comprises a dNTP reagent trough, a sample adding needle frame and a plurality of sample adding needles installed on the sample adding part; the sample adding needle frame is located on the sample trough; a plurality of trough positions are arranged on the sample trough. The sample adding device and system for pyrosequencing have the advantages of being easy and convenient to operate and rapid in detection.

Description

technical field [0001] The invention relates to a sampling device for pyrosequencing, in particular to a pyrosequencing-based sampling device and system for pyrosequencing, belonging to the field of gene detection. Background technique [0002] 1. Overview of Pyrosequencing [0003] Pyrosequencing is a sequencing technology developed in 1987 based on the detection of pyrophosphate (PPi) released during DNA synthesis. The pyrosequencing reaction is catalyzed by a series of enzymes. Visible light proportional to the polymerization number of deoxynucleoside triphosphate (dNTP) is generated, and the purpose of determining the DNA sequence can be achieved by detecting visible light. There are two implementation methods of pyrosequencing: liquid phase pyrosequencing (Liquid Phase Pyrosequencing) and solid phase pyrosequencing (Solid Phase Pyrosequencing). [0004] Liquid-phase pyrosequencing is an enzyme cascade chemiluminescent reaction in the same reaction system catalyzed by ...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12M1/34C12M1/26C12Q1/68
CPCC12N15/1017C12Q1/6806C12Q1/6827C12Q1/6869C12Q2565/301C12Q2535/122C12Q2523/32C12Q2565/631C12Q2563/107
Inventor 刘丹孙悦陈立波
Owner 菲思特(上海)生物科技有限公司
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