High-salinity-resistant nucleic acid sensor for lead and application of nucleic acid sensor
A sensor, salt nucleic acid technology, applied in the field of heavy metal detection, can solve the problems of poor repeatability, low sensitivity, limitations, etc., and achieve the effects of rapid response, high specificity and sensitivity, and rapid detection
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Embodiment 1
[0069] The preparation of embodiment 1 lead ion deoxyribozyme and the generation of cleavage product
[0070] The substrate chain, enzyme chain and DNAzyme cleavage products of the DNAzyme designed for lead ions are as follows:
[0071]
[0072]
[0073] Note: GACTC in the amplified template D is the Nt.BstNBI nicking endonuclease recognition sequence, and the first four base pairs of the sequence (between C and A) are the synthetic strand cleavage sites; DNAzyme cleavage products C and The amplification product F is completely complementary to the amplification template D; the TTGGGGGGT sequence at the end of the DNAzyme substrate chain A is added to increase the Tm value of the template binding; the lead ion cleavage site is at the rA of the DNAzyme substrate chain A after.
[0074] The preparation method of lead ion deoxyribozyme:
[0075] Mix 4 μL of 10 μM DNAzyme substrate chain stock solution with 4 μL of 10 μM DNAzyme enzyme chain stock buffer (final concentrati...
Embodiment 2
[0077] The amplification of embodiment 2 lead ion deoxyribozyme cleavage product
[0078] The system for isothermal amplification reaction consists of two parts (system A and system B). Amplification reaction system composition: 30 μL system.
[0079] Part A system composition: 24.2μL system
[0080] Amplification template (1μM stock solution): 6μL (final concentration 0.2μM)
[0081] dNTPs (2.5mM stock solution): 3μL
[0082] Cutting product of lead ion DNAzyme (1 μM): 6 μL, final concentration 0.2 μM
[0083] Ultrapure water: 9.2μL
[0084] Part B system composition: 5.8 μL
[0085] Bst DNA polymerase (8U / μL stock solution): 0.1μL (final concentration 0.02U / μL)
[0086] Polymerase reaction buffer solution (10x stock solution): 3 μL (final concentration 1x)
[0087] Nt.BstNBI nicking endonuclease (10U / μL stock solution): 1.2μL (final concentration 0.37U / μL)
[0088] Nt.BstNBI nicking endonuclease reaction buffer solution (10x stock solution): 1.5 μL (final concentrati...
Embodiment 3
[0092] Example 3 Preparation of G-quadruplex functional nucleic acid chromogenic sensor
[0093] 80 μL enzyme activity buffer (100mM Tris, 120mM NaCl, 10mM MgCl 2 , 100mM KCl, pH8.4), 10μL hemin dilution solution (2μL hemin stock solution (10μM) mixed with 1mL enzyme activity buffer) mixed with 10μL of the material to be developed (i.e. the amplified target product), mixed After homogenization, react at 37°C for 30 minutes to make the amplified target product F combine with hemin to form a G-quadruplex structure, add 50 μL TMB chromogenic solution, mix well, react at 37°C for 10 minutes, add 50 μL 2M H 2 SO4, mix well to obtain a color-developed product, and obtain a G-quadruplex functional nucleic acid color sensor.
[0094] Then carry out microplate reader to measure OD 450 .
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