Apple fruit 'ester type' character identification SNP (single nucleotide polymorphism) molecular marker, primer and application of marker
A technology of molecular markers and apples, which is applied in the field of crop genetics and breeding, can solve problems such as no relevant records, achieve the effects of improving efficiency, improving breeding work efficiency, and realizing early selection
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Embodiment 1
[0035] The SNP molecular markers identified by the apple fruit ester volatile components of the present invention are obtained by the following methods:
[0036] 1. Reagents and instruments used
[0037] Genomic DNA (gDNA) of individuals in the test population was extracted using the Plant Genomic DNA Kit (TIANGEN) kit, which was purchased from Tiangen Biochemical Technology (Beijing) Co., Ltd.; restriction enzymes for enzyme digestion EcoRI Purchased from Sigma-Aldrich Company in the United States; reagents required for post-processing of enzyme-digested samples: adapters, ATP, ligase, blunt-end enzyme, etc. were purchased from Illumina Company in the United States; The IlluminaHiseq 2500 sequencing platform (USA) was used.
[0038] 2. SNP molecular marker acquisition method
[0039] (1) Construction of genetic linkage map of 'Red Star' X 'Guoguang'
[0040] The "ester-flavored" apple variety 'Red Star' with higher fruit volatile components was used as the female parent, ...
Embodiment 2
[0061] In order to efficiently, quickly and accurately detect the SNP molecular marker of the present invention, it can be made into a SNP gene chip. The above-mentioned PCR primers for amplifying the SNP molecular markers are fixed on the SNP gene chip, and the gene chip is manufactured by Affymetrix Company of the United States. The genomic DNA of the test population was extracted, KASP reaction was performed on the SNP gene chip, the SNP molecular marker was amplified, and the content of volatile esters in the fruit of the test population was quickly identified through the genotype of the SNP molecular marker. The specific operation is as follows:
[0062] The young leaves of 88 'Hongxing'×'Guoguang' mapping population strains were collected, and the genomic DNA of the experimental population and varieties were extracted using the Plant Genomic DNA Extraction Kit (Plant Genomic DNA Kit, Beijing Tiangen Company). KASP reaction was performed on the SNP gene chip. KASP ampli...
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