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Next-generation sequencing library building kit and method for improving library conversion rate

A technology of library transformation rate and second-generation sequencing, applied in the field of second-generation sequencing library construction kits, can solve the problems of low library construction and transformation efficiency, low conversion rate of micro-initial sample library construction, unable to meet application scenarios, etc. Consumption of reagents and consumables, improving the efficiency of joint connection, and improving the efficiency of connection steps

Pending Publication Date: 2021-06-11
SHANGHAI DYNASTYGENE CO
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  • Claims
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AI Technical Summary

Problems solved by technology

For trace amounts of DNA samples (<50ng), the conversion efficiency of library construction kits commonly used at home and abroad is relatively low. For example, Roche KAPA Biosystems’ KAPA Hyper series of library construction has a good reputation in the industry and is also the most widely used. The conversion rate of the library in the official manual of the kit is 5-40%, which is not enough for many application scenarios
Therefore, there is still a need to improve the existing technology to improve the low conversion rate of the existing micro-initial sample library.

Method used

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  • Next-generation sequencing library building kit and method for improving library conversion rate
  • Next-generation sequencing library building kit and method for improving library conversion rate
  • Next-generation sequencing library building kit and method for improving library conversion rate

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Embodiment Construction

[0040] The following examples facilitate a better understanding of the present invention, but do not limit the present invention. The experimental methods in the following examples are conventional methods unless otherwise specified. The test materials used in the following examples, unless otherwise specified, were purchased from conventional biochemical reagent stores. Quantitative experiments in the following examples are all set to repeat the experiment three times, and the results are averaged.

[0041]Aiming at the technical problem of the low conversion rate of existing micro-sample library construction mentioned in the background technology section, in a typical embodiment of the present invention, a method for constructing a high-throughput sequencing library is provided. The construction method includes: The genomic DNA of the sample is fragmented to obtain DNA fragments; use the first enzyme mixture and the first buffer to repair the DNA fragments and add A to obta...

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Abstract

The invention relates to a method and a kit in the technical field of biology, and concretely relates to a next-generation sequencing library building kit and method for improving the library conversion rate. The kit and the method are particularly suitable for next-generation sequencing application of trace samples. The kit comprises: enzyme mixed solutions which comprises a first enzyme mixed solution, a second enzyme solution and a third enzyme mixed solution, wherein the first enzyme mixed solution is formed by mixing T4 polynucleotide kinase, T4 DNA polymerase, a Klenow fragment and Taq enzyme according to a ratio of 3: 1: 2: 1, the second enzyme solution is T4 DNA ligase, and the third enzyme mixed solution is a mixed solution of 2X QuarTaq HiFi HotStart; buffer solutions which comprise a first buffer solution corresponding to the first enzyme mixed solution and a second buffer solution corresponding to the second enzyme mixed solution, wherein the second buffer solution is formed by mixing Tris-HCl with the concentration of 0.1-0.6 M, MgCl2 with the concentration of 0.05-0.1 M, DTT with the concentration of 0.01-0.05 M, ATP with the concentration of 1-10 mM, PEG6000 with the concentration of 30%-50% and 1, 2 propylene glycol with the concentration of 10-20%; and a linker, an index sequence and a universal primer.

Description

technical field [0001] The present invention relates to methods and kits in the field of biotechnology, in particular, to a next-generation sequencing library construction kit and method for improving library conversion rates. Background technique [0002] High-throughput sequencing technology, called Next Generation Sequencing (NGS) in some literatures, is an epoch-making revolutionary change to traditional sequencing (Sanger sequencing). Thousands of DNA molecular sequences were determined. [0003] In recent years, more and more genomes including human, Arabidopsis and rice have been sequenced. Whole genome sequencing provides a solid platform for cloning of important genes, phylogenetic evolution of genes and genomics research. However, there are still some rare species with less genomic DNA (less than 50ng) due to the difficulty in obtaining samples or the low concentration of genomes obtained from small individuals. [0004] Because ctDNA carries all the mutation inf...

Claims

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Application Information

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IPC IPC(8): C40B50/06C40B40/08C40B40/06C12Q1/6806
CPCC40B50/06C40B40/08C40B40/06C12Q1/6806C12Q2521/101C12Q2521/501C12Q2527/125C12Q2525/191C12Q2525/173C12Q2531/113C12Q2525/301
Inventor 张满仓曾志鹏
Owner SHANGHAI DYNASTYGENE CO
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