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Isothermal nucleic acid amplification reaction reagent, isothermal nucleic acid amplification method and application thereof

A technology for isothermal nucleic acid amplification and reaction reagents, which is used in biochemical equipment and methods, and the determination/inspection of microorganisms. High, easy to judge the response result

Active Publication Date: 2021-10-08
ANBIO XIAMEN BIOTECHNOLOGY CO LTD
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0003] The operation process of PCR-Sanger sequencing method mainly includes four main steps of PCR amplification and PCR product purification, sequencing reaction, sequencing and result analysis; the main disadvantages of PCR-Sanger are: low sensitivity, special requirements for reagents and instruments, Not easy to popularize; complex operation, relatively high cost, slow speed, and low throughput; PCR-pyrosequencing method has high detection sensitivity, and the analysis of short fragments is mainly carried out through special reagents and instruments; long fragments cannot be analyzed
[0006] However, in vitro amplification technology is prone to inhibition in practical applications.
Sampling methods, sample types, extraction reagents, etc. affect the quality of the obtained DNA or RNA templates, resulting in different degrees of amplification inhibition, which needs further improvement

Method used

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  • Isothermal nucleic acid amplification reaction reagent, isothermal nucleic acid amplification method and application thereof
  • Isothermal nucleic acid amplification reaction reagent, isothermal nucleic acid amplification method and application thereof
  • Isothermal nucleic acid amplification reaction reagent, isothermal nucleic acid amplification method and application thereof

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Embodiment 1

[0053] This embodiment provides that the above-mentioned isothermal nucleic acid amplification reaction reagent is applied to the detection of human immunodeficiency virus nucleic acid (HIV-1 RNA) for non-disease diagnosis purposes. Download the HIV virus genome sequence from NCBI, and find the conserved region by comparing the sequence with software such as MEGA. We manually design the primers according to the principle of base complementarity between the primer and the template, and use the primer software to calculate the TM value of the primer, and preliminarily screen out the TM value and sequence. Primers, remove primers with consecutive identical bases to avoid the formation of primer dimers. And then through experiments for verification and re-screening.

[0054] Firstly, the primer sequences obtained by final design and screening for implementing the present invention are shown in Table 2, and the primers in Table 2 were synthesized to obtain a primer composition for ...

Embodiment 2

[0087] This embodiment provides that the above-mentioned isothermal nucleic acid amplification reaction reagent is applied to the detection of respiratory syncytial virus for non-disease diagnosis purposes.

[0088] Download the genome sequence of respiratory syncytial virus from NCBI's Influenza A virus species library, and find the conserved region by comparing the sequence with software such as MEGA. We manually design primers according to the principle of base complementarity between primers and templates, and use the primer software to calculate the TM value of the primers. , Preliminary screening of primers by TM value and sequence, eliminating primers with consecutive identical bases, to avoid the formation of primer dimers. And then through experiments for verification and re-screening.

[0089] Firstly, the sequences of the primers used for implementing the present invention obtained through final design and screening are shown in Table 9, and the primers in Table 9 w...

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Abstract

The invention discloses an isothermal nucleic acid amplification reaction reagent, an isothermal nucleic acid amplification method and application thereof; the isothermal nucleic acid amplification reaction reagent provided by the invention selects surfactin, TX-100, Tween 20 and other mild surfactants to cooperate with DMSO, sucrose, trehalose, hot start Bst polymerase and high-temperature-resistant hot start reverse transcriptase; the reaction specificity is high; pathogens can be split; genome nucleic acid of the pathogens can be released; a highly inhibition-resistant buffer system is provided; direct amplification of blood samples, respiratory tract samples and the like can be realized; and extraction-free amplification is realized.

Description

technical field [0001] The invention belongs to the field of biotechnology, and in particular relates to an isothermal nucleic acid amplification reaction reagent, an isothermal nucleic acid amplification method and applications thereof. Background technique [0002] In the field of molecular detection, the methods used for target detection include PCR-direct sequencing method, PCR-pyrosequencing method, fluorescent quantitative PCR method, PCR-gene chip method, PCR-electrophoresis analysis, in situ hybridization (ISH), isothermal amplification, etc. Increase and so on a variety of methods. [0003] The operation process of PCR-Sanger sequencing method mainly includes four main steps of PCR amplification and PCR product purification, sequencing reaction, sequencing and result analysis; the main disadvantages of PCR-Sanger are: low sensitivity, special requirements for reagents and instruments, It is not easy to popularize; the operation is complicated, the cost is relativel...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/70C12Q1/6844
CPCC12Q1/703C12Q1/701C12Q1/6844C12Q2600/16C12Q2531/119C12Q2537/1376C12Q2525/307C12Q2563/107C12Q2537/143C12Q2521/107
Inventor 雷洋白佳委黄认训汪大明
Owner ANBIO XIAMEN BIOTECHNOLOGY CO LTD