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Kit for rapid detection of methylation of cervical exfoliated cells and detection method thereof

An exfoliated cell and detection method technology, applied in the field of rapid detection of cervical exfoliated cell methylation, can solve the problems of low DNA recovery rate, cumbersome pretreatment, and no obvious improvement in detection time, achieve excellent sensitivity and specificity, speed up Enzyme cleavage and amplification reactions, enhanced activity and sustained effects

Active Publication Date: 2022-05-13
西安启晟医药科技有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0003] At present, cytological detection methods and HPV-DNA detection are mainly used in the initial screening of cervical lesions; cytological detection methods have been used for more than half a century, including Pap smear method and liquid-based cytology developed in the past ten years (TCT), since the entire detection process is from sampling-smear preparation-observation-result interpretation, many links are affected by humans, so the probability of missed detection is high; HPV-DNA detection is only the presence or absence of HPV virus , and the presence of HPV virus is mostly transient, which means that these HPV infections that are cleared by autoimmunity will also be judged as positive, leading to overtreatment and colposcopy referral
[0004] In addition to the above two methods, methylation detection is also commonly used for the initial screening of cervical lesions, and the commonly used methods are methylation-specific PCR (MSP), bisulfite sequencing PCR (BSP), and methylation-sensitive PCR (BSP). Resolution melting curve analysis (MS-HRM), fluorescence quantitative method, and gene chip method are all methylation detection technologies based on sulfite modification pretreatment. The principle is that after DNA reacts with sodium bisulfite, no methylation Methylated cytosine (C) can be converted to uracil (U), while methylated cytosine shows no structural change, Methylated cytosine is determined by distinguishing the structural difference between uracil and methylated cytosine pyrimidines; although the BC strategy provides excellent performance in methylation detection, it still has disadvantages such as cumbersome pretreatment, time-consuming process, the need for multiple reagents, and extreme experimental conditions (such as strong acid, strong base, and high temperature), and more Unfortunately, the BC strategy suffers from target degradation, low DNA recovery, and incomplete conversion, leading to inaccurate measurements and poor reproducibility of methylation assays, especially in samples with low methylation abundance
[0005] Therefore, there is an urgent need to explore more sensitive and rapid methylation analysis methods. Methylation-sensitive restriction enzymes (MSREs) are a class of bacterial restriction enzymes that can specifically cut unmethylated CpG dinucleotides in the active site of the enzyme. , leaving only methylated DNA as an intact template for PCR or qPCR; this method can be used to determine the frequency of CpG methylation in any specific region of interest amplified by PCR, compared to the sulfite detection method, The detection operation has been simplified to a certain extent, but the detection time has not been significantly improved

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  • Kit for rapid detection of methylation of cervical exfoliated cells and detection method thereof
  • Kit for rapid detection of methylation of cervical exfoliated cells and detection method thereof
  • Kit for rapid detection of methylation of cervical exfoliated cells and detection method thereof

Examples

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Effect test

Embodiment 1

[0050] 1. Prepare a kit for the rapid detection of cervical exfoliated cell methylation, said kit comprising a primer probe composition, a methylation-sensitive restriction endonuclease, and an enzyme-cleavage amplification buffer; said primer probe The molar concentration of the ZNF671 upstream primer, ZNF671 downstream primer, and ZNF671 fluorescent probe in the composition is 0.5 μmol / L, the molar concentration of the ACTIN upstream primer, ACTIN downstream primer, and ACTIN fluorescent probe is 1 μmol / L, and the PAX1 upstream primer, The molar concentration of PAX1 downstream primer and PAX1 fluorescent probe is 1.2 μmol / L, and the molar concentration of FAM19A4 upstream primer, FAM19A4 downstream primer and FAM19A4 fluorescent probe is 0.8 μmol / L, which is to make the amplification efficiency of each marker Or the fluorescent signal value should be as consistent as possible to facilitate the unification of the result interpretation standard.

[0051] The fluorescent repor...

Embodiment 2

[0087] The fluorescent reporter group in Example 1 is adjusted as follows: ZNF671 fluorescent probe, FAM19A4 fluorescent probe, PAX1 fluorescent probe are labeled with the same fluorescent group (such as FAM fluorescent label), and the fluorescent reporter of the internal reference gene ACTIN fluorescent probe The group marks another channel (such as VIC fluorescent label), and performs methylation detection on the amplification product of the sample to be tested. The detection results are as follows: image 3 As shown in the curve ②, the sum of methylation of ZNF671 gene, FAM19A4 gene and PAX1 gene can be obtained by detecting the FAM fluorescence channel, and the detection efficiency is greatly improved, and the target gene detection Ct in the same sample (especially for the critical value sample) The value is lower. When the methylation level of a single marker is low, if the sum of the methylation levels of the three markers can be detected, more accurate detection results ...

Embodiment 3

[0089] Use various gene combinations as markers to assemble detection kits, perform methylation detection by the method described in Example 1, and the detection data are shown in Table 7 and Figure 4 shown in Table 7 and Figure 4 The percentage data in indicates the positive rate ratio at each stage when each gene combination is used for methylation detection. For the population with high risk of cancer (such as CA), the higher the positive rate of detection indicates the clinical sensitivity of the gene combination for the disease The higher the , the lower the positive rate of detection for normal people and people with low cancer risk, indicating that the gene combination has a higher clinical specificity for the disease, as shown in Table 7 and Figure 4 It can be seen that the gene combination provided by the present invention has excellent sensitivity and clinical specificity compared with other gene combinations, can accurately detect cervical cell lesions, and divid...

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Abstract

The invention discloses a kit for rapid methylation detection of cervical exfoliated cells and a detection method thereof. The kit comprises a primer probe composition, an enzyme digestion amplification buffer solution, methylation sensitive restriction endonuclease and nuclease-free water, the primer probe composition comprises a ZNF671 primer and a probe, a PAX1 primer and a probe, an FAM19A4 primer and a probe, and an ACTIN primer and a probe, the kit is used for detecting the cervical exfoliated cells, the sensitivity and the specificity of a detection result are good, the detection process is simple, and consumed time is short.

Description

technical field [0001] The invention belongs to the technical field of methylation detection, in particular to a kit for rapid detection of methylation in cervical exfoliated cells and a detection method thereof. Background technique [0002] Cervical cancer is the most common gynecological malignancy. Persistent infection with high-risk human papillomavirus (HPV) is closely related to the occurrence of cervical cancer. After normal cervical cells are infected with HPV virus, most HPV viruses can be cleared by the human immune system , Only a small number of women will cause cervical precancerous lesions and develop cervical cancer due to persistent infection. [0003] At present, cytological detection methods and HPV-DNA detection are mainly used in the initial screening of cervical lesions; cytological detection methods have been used for more than half a century, including Pap smear method and liquid-based cytology developed in the past ten years (TCT), since the entire ...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6886C12Q1/686C12N15/11
CPCC12Q1/6886C12Q1/686C12Q2600/154C12Q2563/107Y02A50/30
Inventor 李冰琳龙兴宏
Owner 西安启晟医药科技有限公司