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Water soluble multi-biotin-containing compounds

Inactive Publication Date: 2006-10-12
WILBUR D SCOTT +3
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Benefits of technology

[0015] One aspect of the present invention is directed to discrete multi-biotin-containing compounds that are useful in vivo to amplify a signal or increase the amount of material bound to a site. As used herein, the term “discrete” means a singular molecular entity and not a mixture of molecular entities (such as those resulting from a random polymerization reaction or a random labeling reaction). For example, the amount of radioactivity presented to a cancer cell that has been labeled with an antibody can be greatly increased through the use of multi-biotin-containing compounds according to the invention.
[0018] In structure (A), P is a biotinidase protective group that blocks biotinidase activity. The “biotinidase protective group”, P, reduces the effectiveness of biotinidase to cleave the biotin moiety from the molecule of the invention. P can be one or more of α-amino acids, N-methyl moieties, α-alkyl moieties, or aryl moieties.

Problems solved by technology

One disadvantage of using biotin derivatives for many of these applications is their generally low solubility in aqueous media.
Insolubility of biotin derivatives and biotinylation reagents in aqueous solutions is particularly problematic for in vivo applications where organic solvents cannot be used.
In addition to causing solubility problems, the lipophilic nature of the biotin derivatives with spacer molecules of low water solubility may cause them to associate with blood components, rendering their biological half-life in in vivo applications longer than desired.
Prior investigators have attached water solubilizing moieties to biotin and to compounds containing two biotin moieties, however, the prior art has failed to disclose or suggest biotin-containing compounds that comprise at least three (3) biotin moieties which are resistant to the enzyme biotinidase.
However, these patents only teach biotin-containing compounds of up to two (2) biotin moieties.
These patents also report that the disclosed adducts are not stable in serum due to the presence of biotinidase.
Poor in vivo stability therefore limits the use of such conjugates in therapeutic applications.
This patent, however, does not suggest water-soluble linker moieties of 6 to 50 atoms in length and biotinidase blocking groups in a discrete multi-biotin-containing compound.
Such random biotin-containing compounds have a very limited utility in diagnostic and therapeutic applications.
Further, this patent does not address the need for a biotinidase blocking moiety.
These probes are not discrete molecular entities and do not address the need for resistance to biotinidase activity, nor do they suggest the use of water-soluble linker moieties of 6 to 50 atoms in length.

Method used

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  • Water soluble multi-biotin-containing compounds
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  • Water soluble multi-biotin-containing compounds

Examples

Experimental program
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Effect test

example 1

Method for Synthesizing an Activated Ester of a Biotin Moiety

[0090] The following Example sets forth a methodology for preparing a tetrafluorophenyl (TFP) ester of a biotin moiety that is subsequently reacted with a water-soluble linker moiety and then a cross-linker of at least tri-functionality to produce a biotin-containing compound according to the invention. Other methods for preparing activated esters generally known in the field can be used to prepare biotin activated esters containing any number of phenolic and other hydroxyl (e.g., N-hydroxylsuccinimide) groups.

Preparation of Biotin Tetrafluorophenyl Ester

[0091] Biotin (10 g, 40.9 mmol) was dissolved in 200 mL warm (70° C.) DMF under an argon atmosphere. The solution was allowed to cool to ambient temperature and 10 mL (82 mmol) triethylamine was added, followed by the addition of 16 g (61 mmol) of 2,3,5,6-tetrafluorophenyl trifluoroacetate. The reaction was stirred at room temperature for 30 min and solvent was remove...

example 2

Method for Preparation of a Water-soluble Biotinylation Reagent

[0092] This Example sets forth a general methodology for preparing a biotin moiety linked to a water-soluble linker moiety. In the example, a diamino-ether linker is used. Ether linkers containing terminal functionalities such as, an amine and a carboxylate; an amine and an alcohol; an alcohol and a carboxylate; and two alcohols, can also be prepared using the method described. The general method can also be used when the linker contains polyhydroxyl groups if the terminal functionalities are two amines, or are an amine and a carboxylate.

Preparation of A Biotin Compound Containing A Trioxo-Amide Linker With An Amine Terminus

[0093] The TFP ester of biotin (5 g, 12.8 mmol) (Example 1) was dissolved in 200 mL anhydrous DMF. In another flask containing 28 g (128 mmol) 4,7,10-trioxa-1,13-tridecanediamine was added 4 mL of triethylamine. Both the flasks were cooled to 0-5° C. by ice water. The TFP ester of biotin was adde...

example 3

Reacting an Activated Ester of Biotin with a Diamino-linker that has One Amine Protected

[0094] This Example sets forth a general methodology for preparing a biotin / water-soluble linker adduct wherein one amine group was protected, i.e., a diamino-ether linker was protected as a t-Boc derivative prior to addition to the biotin activated ester. Any number of amine protecting groups can be utilized in this reaction. The primary purpose of the reaction method, as opposed to Example 2, is to be able to react one equivalent of diamino linker molecule with one equivalent of the biotin active ester. The reaction scheme is set forth below.

Reaction Step 1: Preparation of N-Boc-4,7,10-trioxatridecane-13-amine

[0095] To a solution of 151.40 g (687.25 mmol) of 4,7,10-trioxa-1,13-tridecaneamine in 700 mL CHCl3 was added 6.00 g (27.5 mmol) of di-tert-butyl dicarbonate in 100 mL CHCl3 with stirring at ambient temperature over 30 minutes. The mixture was stirred for 12 hours, washed with water ...

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Abstract

Water-soluble discrete multi-biotin-containing compounds with at least three (3) biotin moieties are disclosed. The water-soluble biotin-containing compounds may additionally comprise one or more moieties that confer resistance to cleavage by biotinidase or that is cleavable in vitro or in vivo. The discrete multi-biotin-containing compounds may include a reactive moiety that provides a site for reaction with yet another moiety, such as a targeting, diagnostic or therapeutic functional moiety. Biotinylation reagents comprising water-soluble linker moieties are also disclosed and may additionally comprise a biotinidase protective group. Methods for amplifying the number of sites for binding biotin-binding proteins at a selected target using multi-biotin compounds also are disclosed.

Description

CROSS-REFERENCE TO RELATED APPLICATIONS [0001] This application is a continuation-in-part of application Ser. No. 091324,267, filed Jun. 2, 1999, which was a continuation-in-part of application Ser. No. 08 / 798,413 filed Feb. 7, 1997, now abandoned, which claims priority from U.S. Provisional Patent Application No. 60 / 011,321, filed Feb. 8, 1996.FIELD OF THE INVENTION [0002] The present invention relates generally to discrete multi-biotin-containing compounds, biotinylation reagents, and methods for synthesizing such compounds and reagents. More specifically, the present invention relates to discrete biotin-containing compounds with at least three (3) biotin moieties, and to biotinylation reagents suitable for in vitro and in vivo applications which biotinylation reagents are soluble in aqueous media and preferably resistant to biotinidase. The biotin-containing compounds additionally may comprise constituents that confer other functionalities, such as conjugation sites for diagnosti...

Claims

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Application Information

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IPC IPC(8): A61K31/765A61K31/4188C07D498/02
CPCA61K31/4188A61K31/765Y10S424/16C07D495/04C07D519/00C07D233/32Y02P20/55
Inventor WILBUR, D. SCOTTPATHARE, PRADIP M.HAMLIN, DONALD K.WAN, FENG
Owner WILBUR D SCOTT
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