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PCR (Polymerase Chain Reaction) detection liquid for loss of loci SY84, SY134 and SY255 of human Y chromosome

A Y chromosome and detection solution technology, which is applied in the field of PCR detection of human Y chromosome deletion, can solve the problems of uneven nucleic acid expansion efficiency, decreased amplification efficiency, and cumbersome operation process, etc.

Inactive Publication Date: 2013-10-02
ZHEJIANG CELLPRO BIOTECH
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

When detecting these STS sites by PCR, water, magnesium ions, buffer solutions (KCl and Tris-HCl, etc.), dNTPs, primers, enzymes, etc. need to be gradually added to the reaction system in steps during the operation. The operation process is cumbersome, and each group added Due to the different proportions of the components, the expansion efficiency of nucleic acid is different, and there are problems such as a sharp drop in amplification efficiency when repeated freezing and thawing.

Method used

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Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0008] PCR detection solution for deletion of human Y chromosome SY84, SY134 and SY255 sites, Mg in the PCR detection solution 2+ The concentration of dNTP is 2.632mM, the concentration of dNTP is 0.263mM, the concentration of Taq enzyme is 105u / mL, the concentration of KCl is 50.63mM, the concentration of Tris-HCl (pH 8.3) is 10.53mM, and the concentration of SY84 primer is 0.263 μM, the concentration of SY134 primer is 0.421 μM, and the concentration of SY255 primer is 0.263 μM. The PCR detection solution can be stored at a low temperature of -20°C for a long time, and the detection effect will not be affected by freezing and thawing during use. Only DNA templates need to be added during detection, and the operation is simple and fast. Taq enzyme was prepared by ourselves, dNTP was purchased from Treasure Bioengineering (Dalian) Co., Ltd., and SY84 primers, SY134 primers and SY255 primers were purchased from Yingwei Jieji (Shanghai) Trading Co., Ltd.

Embodiment 2

[0010] The human DNA in the anticoagulated whole blood was extracted by column elution as template DNA; during detection, 1 uL of DNA template was added to the PCR detection solution in Example 1, and PCR amplification reaction was carried out in an Eppendorf PCR instrument. The PCR cycle conditions are: 94°C pre-denaturation for 5 minutes, then 94°C denaturation for 30 sec, 57°C renaturation for 30 sec, 72°C extension for 60 sec, after 33 cycles of reaction, 72°C for another 10 min; PCR products can be stored in a 4°C refrigerator. Take 10uL of PCR product, stain with Gel red, electrophoresis on 2% agarose, electrophoresis voltage 5V / cm, electrophoresis time 35min, the position and length of the reaction product band; if there is a 326bp band in the AZFa region, SY84 is not deleted, if the AZFb region If a 301bp band appears, SY134 is not deleted. If a 126bp band appears in the AZFc region, SY255 is not deleted. Otherwise, gene deletion occurs, and the clinical manifestation i...

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PUM

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Abstract

The invention discloses PCR (Polymerase Chain Reaction) detection liquid for the loss of loci SY84, SY134 and SY255 of a human Y chromosome. The PCR detection liquid comprises magnesium ions, dNTP (deoxy-ribonucleoside triphosphate), Taq enzyme, potassium chloride, tris(hydroxymethyl)aminomethane-hydrochloric acid, a SY84 primer, a SY134 primer and a SY255 primer; and in the PCR detection liquid, the concentration of the magnesium ions is 2.632 mM, the concentration of the dNTP is 0.263 mM, the concentration of the Taq enzyme is 105 u / ml, the concentration of the potassium chloride is 50.63 mM, the concentration of the trisaminomethane-hydrochloric acid with the pH of 8.3 is 10.53 mM, the concentration of the SY84 primer is 0.263 [mu]M, the concentration of the SY134 primer is 0.421 [mu]M and the concentration of the SY255 primer is 0.263 [mu]M. The PCR detection liquid can be stored for a long term at low temperature and can withstand repeated freezing and thawing, only a DNA (Deoxyribonucleic Acid) template is required to be added during detection, the operation is simple, convenient and fast, and the amplification effect is specific and sensitive.

Description

technical field [0001] The invention relates to a PCR detection technology for human Y chromosome deletion, in particular to a PCR detection solution for deletion of human Y chromosome SY84, SY134 and SY255 sites. Background technique [0002] About 10% to 15% of couples of childbearing age are infertile, of which 50% are caused by men. In addition to clear causes such as vas deferens obstruction and infection, changes in genetic traits are also an important reason, mainly due to male spermatogenesis disorders. Manifested as severe oligospermia (less than 2×10 6 / mL~5×10 6 / mL) or no sperm. About 20% of clinically infertile men are caused by hereditary, non-obstructive azoospermia or oligospermia, and most of these patients have normal karyotype tests; but Y chromosome microdeletions lead to hereditary infertility. At present, PCR of STSs is generally used to obtain Y chromosome microdeletion information, but the deletion rate reported in various literatures varies from 1...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68
Inventor 张彩霞曾桥薛志刚
Owner ZHEJIANG CELLPRO BIOTECH