One-step Wash Magnetic Bead Method Saliva DNA Extraction Kit
A kit and washing solution technology, which is applied in the field of magnetic bead method saliva DNA extraction kit, can solve the problems of insufficient concentration of extraction effect, easy pollution, time-consuming and other problems
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Embodiment 1
[0038] Example 1 Reagent preparation and basic extraction process
[0039] Prepare Extraction Reagent 1 according to the following recipe:
[0040]Lysate: Tris 55mM, EDTA 15mM, NaCl 0.3M, NaDC 0.4%, Dodecyl-N-Betaine 0.2%, NLS 0.5%, GuHCl 75%, TritonX100 2%, NH 4 Cl 0.15%, mercaptoethanol 0.5%, pH 7.0;
[0041] Binding solution: isopropanol 65%, PEG 8000 10%, Brij 58 3%, pH 7.0;
[0042] Proteinase K solution: proteinase K 20mg / ml;
[0043] Washing solution: GuHCl 7M, Tris 10mM, ethanol 40%, sodium bicarbonate 40mM, pH 9.0;
[0044] Elution buffer: Tris 20 mM, EDTA 0.2 mM, pH 8.5.
[0045] Control Reagent 2 was prepared according to the recipe of Reagent 1 (replace sodium bicarbonate with sodium acetate 10mM)
[0046] Control reagent 3 was prepared according to the formula of reagent 1 (dodecyl-N-betaine-free, NaDC 0.6%)
[0047] Follow the steps below for DNA extraction:
[0048] (1) Take 200ul of fresh saliva into a 1.5ml centrifuge tube, then add a total of 400ul of ...
Embodiment 2
[0053] Example 2 Effect verification of the kit formulation of this application
[0054] 1 The role of sodium bicarbonate and DPTA
[0055] Use the reagents 1-3 and DNA extraction methods in Example 1 to extract the same saliva sample, use the Qubit® (fluorescent dye-based method) detector and the matching kit to detect the concentration of the extracted DNA and detect OD A260 / 280, the results as follows:
[0056]
[0057] Repeated results across multiple samples were similar. We speculate that the acid-base / charged conditions in the washing solution have a great influence on the washing effect of mucin hydrolysates. Among the various formulations in the experiment, only slightly more alkaline sodium bicarbonate can effectively remove proteins without affecting DNA stability. effect; the addition of zwitterionic surfactants is beneficial to fully lyse cytolytic proteins and make the proteins easier to remove during washing.
[0058] Comparison of the one-step washing kit...
Embodiment 3
[0063] Example 3 Use the kit of this application for actual detection
[0064] Use the kit of this application to extract 4 pairs of 8 subjects' saliva (collected simultaneously with blood samples) DNA for STR locus typing in paternity testing (Promega Power Plex16, 16 loci, ABI9700 PCR instrument), and Compared with the genotyping of DNA extracted from blood, the genotyping of all 128 loci of the 8 subjects was exactly the same. It is preliminarily proved that the samples extracted by the kit of the present application can be used for subsequent molecular biology detection.
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