A kind of preparation method of homogeneous fucoidan
A technology of fucoidan and alginate, which is applied in the direction of fermentation, etc., can solve the problems of low degradation efficiency of a single enzyme, poor product uniformity, and restrictions on wide application
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Embodiment 1
[0021] Example 1: Gene Cloning of AlyV and AlyF
[0022] 1 gene clone
[0023] 1.1 Gene cloning of AlyV
[0024] First, genome sequencing and homologous protein sequence analysis of Vibrio pelagius with alginate degradation activity were carried out, and the gene sequence information of AlyV was obtained (its amino acid sequence is SEQ ID NO: 1; the sequence of the coding gene is SEQ ID NO: 2). Sequence analysis showed that AlyV is a new uncharacterized alginate lyase, which belongs to the polysaccharide lyase 7 family (PL-7). According to the CAZy database, among the characterized members of the PL-7 family, the sequences of the three proteins A9mT, AlxM and AlyVOA are the most similar to AlyV, with homology of 47.1%, 43.4% and 42.8%, respectively. The amino acid sequence alignment is as follows: figure 1 shown. These three homologous alginate lyases of AlyV all have the substrate specificity of polyM, A9mT and AlyVOA are derived from Vibrio, and AlxM is derived from Phot...
Embodiment 2
[0073] Embodiment 2: Combined degradation of alginate
[0074] 1. Synergistic research on enzyme activity
[0075] The reaction conditions of the present embodiment are as follows:
[0076] The substrate was 2 mg / ml AL, the buffer was 20 mM Tris-HCl (pH 8.0), 500 mM NaCl, and reacted at 30° C. for 1 h.
[0077] AlyV and AlyF have polyM and polyG-specific alginate lyase activities, respectively, but when they act alone, they cannot completely crack alginate (AL) into fucoidan oligosaccharides, but the joint reaction of AlyV and AlyF can completely cleavage AL degradation, such as Figure 4 As shown, the "10:0" and "0:10" lanes in the figure represent the degradation of AL by AlyV and AlyF respectively.
[0078] Set the final concentration of the "AlyV+AlyF" group to 10nM AlyV+10nM AlyF, the final concentration of the "AlyV" group to 20nMAlyV, and the final concentration of the "AlyF" group to 20nM AlyF.
[0079] Take the ΔOD of the "AlyV+AlyF" group 235 The value is 100%, ...
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