The invention relates to ocean chemical engineering technique field, concretely is a method for extracting fucoidan from a kelp soak solution, which includes steps: adding 1-10 ml flocculant to kelp soak solution per 150 ml, stirring for 2-10 min, flocculating for 10 min to 8 h, swelling for 1-24 h under condition that pH is 2-6 after centrifuging and depositing, stirring for 1-4 h to dissolve, filtrating and adjusting the filtrate to neutrality, decompressing and concentrating, adding ethanol to the concentrated solution, filtrating to obtain deposition, washing and drying the deposition to obtain the fucoidan. The invention relates to employs chitosan and its derivative as flocculant to flocculate and deposit ''sugar glue'' from kelp soak solution, and then extracts fucoidan from the ''sugar glue''. The advantages of the invention are: resources are utilized comprehensively, operation is simply, quantity of used acid and base is reduced, and quantity of the obtained fucoidan reaches 5-16% of quantity of the deposition.