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A set of molecular marker primer combinations and their application for rapid and high-throughput identification of sex traits in Torreya torreya

A molecular marker and high-throughput technology, applied in the field of molecular biology, can solve the problems of unsuitable high-throughput detection technology platform, high technical threshold and high detection cost, cumbersome operation and technical links, etc., to improve accuracy and detection efficiency , easy to distinguish, better effect of PCR amplification

Active Publication Date: 2021-05-25
NINGBO ACAD OF AGRI SCI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

As of the present invention, although there have been research reports on the early identification of Torreya sex from aspects such as RAPD and AFLP markers, its operation steps involve processes such as enzyme digestion, connection, and gel electrophoresis, which are very cumbersome, and the technical threshold and detection cost are very high. High, poor practicability, and its detection accuracy is unknown
In addition, the invention patent with the authorized announcement number CN201810144040.1 discloses a specific molecular marker TGMI001 for the sex identification of Torreya torreya seedlings, wherein TGMI001, a male-specific molecular marker of Torreya torreya, is provided, which can be used to identify the sex of Torreya torreya, but the The invention does not mention whether the monoecious plant type of Torreya chinensis can be identified; in addition, the PCR product fragment of the molecular marker TGMI001 is relatively long (461bp), which is not suitable for high-throughput detection technology platforms such as fluorescent quantitative PCR instrument genotyping (It is usually required that the product fragment length is <400bp, and the amplification effect of the product fragment length is about 100bp is the best); moreover, the molecular marker TGMI001 requires relatively long PCR amplification time and subsequent traditional gel electrophoresis Detecting the size of the product, etc., the sensitivity is lower than that of a fluorescent quantitative PCR instrument, and the operation and technical links are relatively cumbersome, time-consuming and labor-intensive

Method used

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  • A set of molecular marker primer combinations and their application for rapid and high-throughput identification of sex traits in Torreya torreya
  • A set of molecular marker primer combinations and their application for rapid and high-throughput identification of sex traits in Torreya torreya
  • A set of molecular marker primer combinations and their application for rapid and high-throughput identification of sex traits in Torreya torreya

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Effect test

Embodiment 1

[0033] A set of molecular marker primer combinations and their application for rapid and high-throughput identification of sex traits in Torreya torreya, the detailed steps are:

[0034] (1) Primer synthesis: according to the sequence information in Table 1, entrust a relevant biotechnology company to synthesize primer JY1754;

[0035] Table 1: Related Primer Sequences

[0036]

[0037]

[0038] (2) Extraction of sample leaf DNA of Torreya torreya population (Table 2):

[0039] Use the magnetic bead method plant genomic DNA extraction kit (Mag-MK Plant Genomic DNA Extraction Kit, Shanghai Sangong Bioengineering Co., Ltd.) to extract the genomic DNA in the tender leaves of Torreya torreya to be tested, and refer to the instructions for the specific steps; after the extraction, separate Take 2 μl of the DNA stock solution and test it on a 1.0% agarose gel; finally, dilute the DNA stock solution into a working solution with a concentration of 40ng / μl for subsequent use;

...

Embodiment 2

[0047] A set of molecular marker primer combinations and their application for rapid and high-throughput identification of sex traits in Torreya torreya, the detailed steps are:

[0048] (1) Primer synthesis: according to the sequence information in Table 1, entrust a relevant biotechnology company to synthesize primer JY1754;

[0049] Table 1: Related Primer Sequences

[0050]

[0051] (2) Extraction of sample leaf DNA of Torreya torreya population (Table 2):

[0052] Use the magnetic bead method plant genomic DNA extraction kit (Mag-MK Plant Genomic DNA Extraction Kit, Shanghai Sangong Bioengineering Co., Ltd.) to extract the genomic DNA in the young leaves of Torreya torreya to be tested. The specific steps are carried out according to its instructions; after the extraction is completed Take 2 μl of the DNA stock solution and test it on a 1.0% agarose gel; finally, dilute the DNA stock solution into a working solution with a concentration of 40 ng / μl for subsequent use;...

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Abstract

The invention discloses a group of molecular marker primers for quickly identifying sex traits of Torreya torreya and its application, with the aim of being applied to the early molecular marker-assisted selection of Torreya torreya breeding. The present invention provides a set of molecular marker primers JY1754 that can identify the sex traits of Torreya torreya, and its PCR amplification product is only 97bp, which is especially suitable for high-throughput detection platforms such as fluorescent quantitative PCR instruments, and can be used for rapid identification of sex traits of Torreya germplasm resources . Based on the developed molecular marker primer combination, the present invention provides a method for assisting in screening germplasm resources of different sexes of Torreya torreya, which has important guiding significance in the prediction of sex traits and phenotypes of Torreya torreya, and has the advantages of simple operation, high throughput, and universal use of multiple detection and analysis platforms and accurate results.

Description

technical field [0001] The invention relates to a set of molecular marker primer combinations for rapid and high-throughput identification of the sex traits of Torreya torreya, and provides a method for assisting in identifying or screening the traits of different sex germplasm resources of Torreya torreya, belonging to the field of molecular biology. Background technique [0002] Torreya grandis (Torreya grandis Fort.ex Lindl.cv.Merrillii Hu) is a relict plant of the Tertiary Period, mainly dioecious, and occasionally monoecious. It is a rare plant unique to my country. The precious dried fruit combined with oil extraction is now mainly distributed in Zhejiang, Jiangxi, Jiangsu, Anhui, Fujian and Hunan provinces, and its cultivation area is still expanding year by year. Torreya torreya grows slowly in the early stage, and the gender is difficult to distinguish. The seedlings generally enter the flowering and fruiting period in 15 to 20 years. It is often the phenomenon that ...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/6895C12Q1/6851C12N15/11
CPCC12Q1/6851C12Q1/6895C12Q2600/13C12Q2531/113C12Q2563/107
Inventor 焦云邬玉芬舒巧云
Owner NINGBO ACAD OF AGRI SCI
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