Epithelial ovarian cancer target RET and application thereof in diagnosis and treatment
A technology for ovarian cancer and diagnostic reagents, applied in the field of molecular biology, can solve the problems of lack of typical symptom screening methods, low response rate, chemotherapy resistance and other problems
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Embodiment 1
[0140] Example 1 Analysis of RET gene mutations associated with ovarian cancer
[0141] By analyzing the mutation frequency of 100 tyrosine kinase receptors in TCGA database in epithelial ovarian cancer, the top 5 genes with mutation frequency are: RON, PTK7, ABL1, RET, PDGFRB. Among the five genes, although the RET gene has been marketed as a targeted therapy drug vandetanib in clinical practice, its role in ovarian cancer has not been reported. Therefore, the present inventors conducted intensive studies on RET gene mutations associated with ovarian cancer.
[0142] In TCGA (The Cancer Genome Atlas), COSMIC (Catalogue of Somatic Mutations in Cancer), ICGC (International Cancer Genome Consortium), CCLE (Broad Institute Cancer Cell Line Encyclopedia) databases, potential activating mutations of the RET gene in epithelial ovarian cancer were screened. First, the mutation site of RET gene in epithelial ovarian cancer was selected. Then, the mutations predicted as "possibly dam...
Embodiment 2
[0146] Example 2 Screening for activating mutations of the RET gene
[0147] WT plasmid (available from Queen’s University, Canada), use Not1-HF (NEB#R3189S) and Nhel-HF (NEB#R3131V) to digest the RET-WT sequence in the plasmid, and digest pCDH-CMV-MCS-EF1- Puro lentiviral expression plasmid (System biosciences#CD510B-1), use T4 ligase (NEB#M0202V) to insert the RET-WT fragment into the digested pCDH-CMV-MCS-EF1-Puro lentiviral expression plasmid (System biosciences# CD510B-1), construct the RET-WT plasmid with pCDH backbone. The point mutation kit QuikChange used the point mutation kit (QuikChangeLightning Site-Directed Mutagenesis Kit (#210518)) to successfully construct plasmids containing 14 potential activating mutations of the RET gene with pCDH as the backbone, and plasmids containing the medullary thyroid carcinoma C634R Pathogenic mutation plasmid.
[0148] Using the liposome transient method, 14 kinds of plasmids were used to transfect 293T cells, and the phosphory...
Embodiment 3
[0151] Example 3 Verification of the carcinogenesis of RET-R693H and RET-A750T in ovarian cancer
[0152] Digest the NIH3T3 cells with trypsin, neutralize the culture medium, resuspend and count, press 0.25×10 6 pCDHRET-WT, pCDHRET-R693H, pCDHRET-A750T, pCDHRET-C634R virus infection after the cell confluency reaches 50%, stop the infection with fresh medium after 16 hours, add puromycin containing screening media. On the fourth day, the protein was collected for Western Blot.
[0153] The screened cells were used for Soft Agar experiments. Specifically, the selected cells were diluted to 5×10 with 2×RPMI1640 medium (Hyclone#SH30197.03) and 0.7% supernatant 4 Add 1 cell / well to the solidified lower layer gel, put it back into the cell culture incubator after solidified at room temperature, replenish 200ul fresh medium twice a week, stain with thiazolium blue (Sigma#M5655-1G) after 3 weeks and take pictures , to count the number of clones.
[0154] Result: if Figure 4 As ...
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