Isothermal PCR nucleic acid augmentative method based on dI modified primer and endonuclease V
An isothermal and nucleic acid technology, applied in the field of genetic engineering, can solve problems such as limited length of amplified fragments, failure of target nucleic acid amplification, complicated amplification reaction operation, etc., to achieve convenient simultaneous amplification, improved DNA synthesis speed and efficiency, The effect of high growth rate
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Embodiment 1
[0017] The isothermal PCR amplification of the ampicillin resistance gene in embodiment 1pUC18 plasmid
[0018] The target nucleic acid template molecule in this embodiment is plasmid pUC18, the target nucleic acid to be amplified is the ampicillin resistance gene of plasmid pUC18, and the four normal temperature proteins used are phi 29 DNA polymerase, Escherichia coli endonuclease V, Single-stranded DNA-binding protein and helicase of T7 bacteriophage. The specific implementation steps are as follows:
[0019] In the first step, the primer sequence for amplifying the ampicillin resistance gene of plasmid pUC18 was designed and synthesized. The two primers are pUC18-amp-F and pUC18-amp-R respectively. The base sequences of the two primers are as follows:
[0020] pUC18-amp-F: 5' aatattgaaa aaggaagaxt atgagtattc aacatttccg t
[0021] pUC18-amp-R: 5' gagtaaactt ggtctgacxg ttaccaatgc ttaatcagtg a
[0022] Wherein, the symbol X represents a dI modified nucleotide, and the en...
Embodiment 2
[0027] The isothermal PCR amplification of endonuclease IV gene in the chlamydia genome of embodiment 2
[0028] The target nucleic acid template molecule in this embodiment is Chlamydia genomic DNA, the target nucleic acid to be amplified is the endonuclease IV gene of Chlamydia, and the four high-temperature-resistant proteins used are Taq DNA polymerase, the high-temperature-resistant microorganism T.thermophilus Endonuclease V, single-stranded DNA binding protein and helicase. The specific implementation steps are as follows:
[0029] The first step is to design and synthesize primer sequences for amplifying Chlamydia endonuclease IV gene. The two primers are CpendoIV-F and CpendoIV-R respectively. The base sequences of the two primers are as follows:
[0030] CpendoIV-F: 5'agaaaagacc ttgaaattxt atgaaagtac ttcctcctcc c
[0031] CpendoIV-R: 5'aaaagcactt aaaaaactxc ctaactatct ctgttttttg a
[0032] Wherein, the symbol X represents a dI modified nucleotide, and the entire...
Embodiment 3
[0036] Example 3 Isothermal PCR Amplification of Human Defensin α3 mRNA
[0037] The template in this embodiment is the total cDNA of human total RNA reverse transcription, the target nucleic acid to be amplified is the human defensin α3 cDNA gene, and the four normal temperature proteins used are bacteriophage T7 DNA polymerase (combined with Escherichia coli thioredoxin protein), T7 single-stranded DNA binding protein, T7 helicase and Escherichia coli endonuclease V.
[0038] Before using the isothermal PCR of the present invention to amplify the human defensin α3 cDNA gene, it is necessary to prepare human total cDNA in advance through reverse transcription reaction. Reverse transcription reaction composition: 100ul reverse transcription reaction mixture contains 3 micrograms of human total RNA, 1× reverse transcription buffer, 0.5mM dATP, dTTP, dCTP, dGTP, 2μM oligo-dT oligonucleotide primers, 10 units of RNase A inhibitor, 10 units of M-MLV reverse transcriptase. React ...
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