Avian influenza virus (AIV) as well as kit and vaccine used for detecting and preventing same
An avian influenza virus and kit technology, applied in the direction of antiviral agents, antiviral immunoglobulins, viruses/phages, etc., can solve the problems of inability to identify and prevent avian influenza viruses, transmission, etc.
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Embodiment 1
[0099] The acquisition of embodiment 1 virus
[0100]From 2002 to 2008, commercial Dai Sanhuang chickens were obtained from live poultry wholesale markets in Shanghai. Live poultry samples were collected, including tracheal or cloacal swabs, and the collected samples were placed in isotonic phosphate buffer solution with a pH value of 7.0 to 7.4 containing antibiotics. (PBS). Fully twist and wring out the cotton swab identified as a positive sample, discard the swab, centrifuge the sample solution at 1000r / min for 10min, and take the supernatant as the inoculation material. Take the processed sample and inoculate 9-day-old to 11-day-old SPF chicken embryos through the allantoic cavity at an amount of 0.2 mL / embryo, inoculate 5 embryos for each sample, and incubate in an incubator at 35°C to 37°C. After 18 hours, The death of chicken embryos was observed every 8h. Aseptically collect the dead embryos after 18 hours and the chick embryo allantoic fluid of the surviving chicken...
Embodiment 2
[0101] Example 2 Whole-gene sequencing of three genotypes of H9N2 avian influenza virus
[0102] 2.1 From 2002 to 2008, commercial Dai Sanhuang chickens were obtained from live poultry wholesale markets in Shanghai, and three genotypes of H9N2 avian influenza virus were isolated and identified: A / Chicken / Shanghai / Y1 / 06 (abbreviated as Ck / SH / Y1 / 06, genotype Y1); A / Chicken / Shanghai / Y1 / 07 (abbreviated as Ck / SH / Y1 / 07, genotype Y2); A / Chicken / Shanghai / Y1 / 08 (abbreviated as Ck / SH / Y1 / 08, genotype Y3). The H9 subtype serum used for virus identification was purchased from Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences. The specific primers designed to amplify all 8 gene fragments of H9 subtype AIV were synthesized by Treasure Biological (Dalian) Engineering Company.
[0103] HA gene upstream primer P1: 5'-CAGGGGAATTTCACAACCAGTCAAA-3';
[0104] Downstream primer P2: 5'-GCCAGGGTGTTTTTGCCAATTATAC-3'.
[0105] M gene upstream primer P1: 5'-AAGATGAGCCTT...
Embodiment 3
[0170] Example 3 HA Gene Amino Acid Sequence Analysis
[0171] The deduced amino acid sequence analysis showed that the three genotype strains all contained 7 potential glycosylation sites (Asn-X-Ser / Thr, X is any amino acid except Pro), 5 of which were located in the HA1 part ( 29aa~31aa, 141aa~143aa, 218aa~220aa, 298aa~300aa, 305aa~307aa), and 2 are located in the HA2 part (492aa~494aa, 551aa~553aa). Sequence analysis of the cleavage site revealed that all the strains were RSSR↓GLF and had low pathogenicity to poultry. The amino acids (109aa, 161aa, 163aa, 191aa, 202aa, 203aa) constituting the receptor binding site were relatively conserved in all strains except for the 198th amino acid with a large change. In addition, this study shows that Ck / SH / Y1 / 06 is Gln at site 226 of the HA gene, which proves to be human non-susceptible H9 subtype AIV, while the other two strains are Leu at this site, indicating that they are capable of infecting humans. tropism (as shown in Table ...
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