Application of gene sequences related to syndrome of dampness-heat of liver and gallbladder of chronic hepatitis B (CHB) in traditional Chinese medicine
A chronic hepatitis B, gene sequence technology, applied in the application field of gene sequence, can solve the problem of no chronic hepatitis B and so on
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Embodiment 1
[0034] The preparation of embodiment 1 clinical sample
[0035] (a) Sample preparation for model establishment: 6 chronic hepatitis B patients with TCM liver and gallbladder damp-heat syndrome and 6 chronic hepatitis B patients without TCM liver and gallbladder damp-heat syndrome were fasted in the morning (9-10 a.m.) 3ml of peripheral venous blood was extracted and stored at -20°C in a blood RNA collection tube from Applied Biosystems. This step was completed with the assistance of the Department of Liver Diseases and Laboratory of Shuguang Hospital Affiliated to Shanghai University of Traditional Chinese Medicine.
[0036] (b) Sample preparation for model validation: Collect 35 chronic hepatitis B peripheral venous blood samples for expanded validation, and the processing method is the same as above.
Embodiment 2
[0037] Example 2 Extraction, purification and quality detection of whole blood leukocyte total RNA
[0038] (1) Extraction and purification of total RNA from whole blood leukocytes
[0039] The whole blood RNA extraction kit (Tempus Spin RNA Isolation Reagent Kit) from Applied Biosystems was used to extract and purify the total RNA of leukocytes, and the operation steps were carried out according to the standard operating instructions of the kit.
[0040] (2) Quality detection of total RNA
[0041] The extracted RNA was analyzed with an Agilent 2100bioanalyzer. Clear peak shapes and minimal background fluorescence indicated intact, undegraded RNA (see figure 1 ).
Embodiment 3
[0042] Example 3 Gene expression profile experiment
[0043] (1) Chip experiment process
[0044] The Affymetrix U-219 expression profile chip was used, and the experimental process was carried out in strict accordance with the Affymetrix expression profile chip operation manual.
[0045] (2) Chip scanning and data reading
[0046] chip adopts Scanner 3000 (P / N00-00212, Affymetrix) was used to scan, and CommandConsole Software 3.1 (Affymetrix) was used to read the original data.
[0047] (3) Data standardization
[0048] The quality control qualified data was normalized by Gene Spring Software 11.0 (Agilent), and the algorithm used was MAS5.0.
[0049] (4) Difference screening and statistical analysis
[0050] Differential gene screening, based on the detection signal in 80% of the samples, Gene Spring Software 11.0 (Agilent) was used for the T-test combination of differential genes between groups of chronic hepatitis B with TCM liver and gallbladder damp-heat syndrome a...
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