Cytoplasmic male sterility restorer gene in rice and application thereof
A technology for male sterility and gene recovery, which is applied in the field of genetic engineering to achieve the effects of improving selection efficiency, speeding up the breeding process, and eliminating the need for test crosses.
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[0044] Example 1 Rice restorer gene Rf4 Location and cloning
[0045] The invention uses map-based cloning to clone Rf4 gene.
[0046] First, cross the wild abortive cytoplasmic male sterile line Zhenshan 97A with the restorer line Minghui 63 to establish a F 2 Separate the population and select about 2000 sterile plants for Rf4 Positioning. According to the reported preliminary location on rice chromosome 10 Rf4 The approximate location of the site (Zhang et al., 1997; Zhang Qunyu et al., 2002; Ahmadikhah and Karlov, 2006), in which multiple polymorphic molecular markers as shown in Table 1 were created. Use these marks and F 2 Linkage analysis of sterile populations constructed a Rf4 The linkage map of the locus region, namely figure 1 . There are 2 marks in the picture, namely M19391 and M19256 and Rf4 There is only 1 recombination event between the sites, and there are 4 markers and Rf4 Complete co-separation, that is, zero recombination. which is Rf4 It is located i...
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[0051] Example 2 Rf4 Candidate gene transformation and functional testing
[0052] Design gene-specific PCR amplification oligonucleotide primers according to the upstream and downstream sequences of Os10g0495200. The primer sequence is as SEQ ID NO: 11 (the underline is restriction endonuclease Kpn I cut point) and SEQ ID NO: 12 (underlined Xba I tangent point) as shown.
[0053] SEQ ID NO:11: 5'-ACTTAT ggtacc TAGCAACTGCGAACACACCCTCAAT-3’
[0054] SEQ ID NO: 12: 5'-CGGTCA tctaga ACCAGCAACCTCCCAACCATGACTAT-3’
[0055] The 7.8 kb genome fragment containing the promoter, coding region, and downstream termination sequence was amplified from the restorer line Minghui 63 by PCR technology. The PCR reaction system and reaction conditions are as follows: a 50 μl reaction contains 1 x reaction buffer, 200 μM dNTPs, 100 ng Minghui 63 genomic DNA, 0.3 μM each of the primers, and 1.0 U KOD FX polymerase. 30 cycles: 97 ℃ 15S, 68 ℃ 6 min. Restriction endonuclease Kpn I and Xba I cut a...
Example Embodiment
[0057] Example 3 Rf4 Gene sequence analysis
[0058] Using PCR amplification and sequencing, the functional types of 5 wild-failed restorer lines, Minghui 63, IR24, HNF-W1, HNF-W2, and HNF-W8, were analyzed. Rf4 Allele ( Rf4-M, Rf4-I, Rf4-W1, Rf4-W2, Rf4-W8 ) And the non-functional type of two wild abortive sterile lines Zhenshan 97A and Jin 23A rf4 Allele (rf4-Z, rf4-J ). Among them, HNF-W1, HNF-W2, HNF-W8 Rf4 Allele ( Rf4-W1, Rf4-W2, Rf4-W8 ) Is derived from common wild rice, obtained by crossing and backcrossing indica rice lines with different common wild rice lines. The sequences shown in SEQ ID NO:1 and SEQ ID NO:2 are Minghui 63 and IR24, respectively Rf4-M with Rf4-I Allelic genomic DNA fragments (including the promoter region, CDS, and 3'untranslated region sequences); the sequences shown in SEQ ID NO: 3 to SEQ ID NO: 5 are HNF-W1, HNF-W2, HNF-W8 Rf4-W1, Rf4-W2, Rf4-W8 Allele CDS sequence. These functional types Rf4 The open reading frame of the allele has 234...
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