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A combined tandem repeat (tttacac) 5 dof protein

A technology of tandem repeat sequence and protein, applied in the field of Dof protein factor and its coding gene, can solve the problem of no Dof transcription factor combined with tandem repeat sequence, etc., and achieve the effect of improving plant gene expression activity

Inactive Publication Date: 2017-01-18
JIANGSU UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0004] However, to date there are no reports of Dof transcription factors binding to tandem repeats

Method used

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  • A combined tandem repeat (tttacac)  <sub>5</sub> dof protein
  • A combined tandem repeat (tttacac)  <sub>5</sub> dof protein
  • A combined tandem repeat (tttacac)  <sub>5</sub> dof protein

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0023] Example 1: Tandem Repeats (TTTACAC) 5 Fragment (named TR) synthesis and ligation with pUC18 cloning vector

[0024] Synthesis of three copies of tandem repeats (TTTACAC) 5 fragment, and add it at the beginning and end Eco RI (recognition sequence is 5'-GAATTC-3'), Sac I (recognition sequence is 5'-GAGCTC-3'), sfi IA (recognition sequence 5'-GGCCATTACGGCC-3') and sfi IB (recognition sequence is 5'-GGCCGCCTCGGCC-3') restriction enzyme cleavage site, the synthetic sequence information is as follows 5'- GAATTCGGCCATTACGGCC TTTACACTTTACACTTTACACTTTACACTTTACACTTTACACTTTACACTTTACACTTTACACTTTACACTTTACACTTTACACTTTACACTTTACACTTTACAC GGCCGCCTCGGCCGAGCTC -3', where the underline is the added restriction enzyme site, the gene fragment was synthesized by Shanghai Sonny Biotechnology Co., Ltd. The fragment was linked with pUC18-T vector (purchased from Dalian Bao Bio) and transformed into E. coli Top10 competent cells (purchased from Shanghai Jierui Bioengineering Co., Ltd...

Embodiment 2

[0025] Example 2: Linking of TR fragment to yeast one-hybrid bait vector pHIS2

[0026] The pUC-TR plasmid obtained in Example 1 was EcoR I / Sac I double-enzyme cut, the cut fragment was linked to the pHIS2 (purchased from Shanghai Haike Biotechnology Co., Ltd.) vector with the same double-enzyme cut, and the ligation product was transformed into the transformant (pHIS2-TR) grown after the competent Escherichia coli was transformed. Twelve transformants were randomly selected and inoculated into the liquid LB medium with kana resistance. After shaking at 37°C and 250 rpm for 16 h (overnight), 1 µL of bacterial solution was taken for PCR amplification, and the products were amplified with 2% Agarose gel electrophoresis identification. Experiments show that the empty vector can amplify a fragment of about 150 bp, and the vector successfully inserted into the target fragment can amplify a fragment of about 300 bp. figure 1 It can be seen that bands 1, 2, 5, 7, and 12 may be...

Embodiment 3

[0027] Example 3: Transformation of yeast with pHIS2-TR plasmid

[0028] Pick Y187 yeast colonies from YPDA (complete medium) plates and inoculate them in 3 mL of YPDA liquid medium at 30°C, 220 rpm, and shake for 18-20 hours. Transfer YPDA liquid medium, the culture volume is 50 mL, make the initial OD 600 =0.2, 30°C, 220 rpm, shaking for 4-5 hours, to OD 600=0.6. Then, the cells were collected by centrifugation at 1000 g for 5 min at room temperature. Resuspend the cells with 20 mL of sterile water, mix well, centrifuge at 1000 g for 5 min at room temperature to collect the cells, and discard the supernatant. Resuspend the cells with 5 mL of 0.1 MLiAc (lithium acetate), mix well, centrifuge at 1000 g for 5 min at room temperature to collect the cells, and discard the supernatant. Resuspend the bacterial cells with 1 mL of 0.1 MLiAc, mix well, and dispense into 1.5 mL centrifuge tubes, each 100 µL, for later use. Add 240µL of 50% PEG3350, 36µL of 1M LiAc, 25µL of ssDNA (...

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Abstract

The invention relates to a tandem repeat sequence (TTTACAC)5-binding Dof protein and belongs to the field of a biotechnology. The tandem repeat sequence (TTTACAC)5 has a characteristic of raising plant gene expression activities. Through a yeast one-hybrid experiment, it is identified that a Dof protein factor can bind to the tandem repeat sequence. The protein has an amino acid residue sequence of SEQIDNO.1 in a sequence table. An electrophoretic mobility shift assay (EMSA) further verifies the binding mode between the Dof protein and the tandem repeat sequence. The invention also provides recombinant vectors pUC-Dof and pET-Dof containing a Dof protein coding sequence, and provides a recombinant strain obtained by transformation of the recombinant vectors pUC-Dof and pET-Dof. The (TTTACAC)5-binding Dof transcription factor is obtained for the first time in the invention, which is of important theoretical value in expounding a gene expression regulating mechanism. Thus, the protein provided by the invention is of great significance in production practice.

Description

technical field [0001] The present invention relates to a binding tandem repeat (TTTACAC) 5 The Dof protein, in particular, relates to a plant tandem repeat (TTTACAC) that can bind 5 The Dof protein factor and its encoding gene belong to the field of biotechnology. Background technique [0002] Transcription factors, also known as trans-acting factors, participate in many important biological processes by affecting or controlling the expression of specific genes, such as: signal transduction, morphogenesis, environmental stress response and so on. It is well known that transcription factors can bind to homeopathic regulatory elements in the promoter region to regulate the transcription rate of genes. In addition, transcription factors can also mediate protein-protein interactions (Nat Rev Genet 2004, 5:276-287). At present, many transcription factor gene families have been identified, many of which are plant-specific, such as WRKY family, R2R3-MYB family, bZIP family, MADS...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C07K14/415C12N15/29C12N15/63C12N1/19C12N1/21
CPCC07K14/415
Inventor 曹军陈雨竹李翔
Owner JIANGSU UNIV