Advanced macromolecule transduction domain (aMTD) sequences for improvement of cell-permeability, polynucleotides encoding the same, method to identify the unique features of aMTDs comprising the same, method to develop the aMTD sequences comprising the same
A technology of macromolecules and transduction domains, applied in the field of intracellular transduction of macromolecules, can solve the problems of low cell permeability, hindering clinical development and application, and poor solubility of recombinant proteins.
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Embodiment 1
[0305] Example 1. Development of a new advanced macromolecular transduction domain (aMTD)
[0306] The CPPs (MTS / MTM and MTD) derived from the H region of the signal sequence (HRSP) do not share homologous features of common sequence, sequence motif and / or common structure. In the present invention, the goal is to develop improved hydrophobic CPPs that meet the newly identified "key factors" of common sequence and structural motifs formatted with "common functions" to facilitate the integration of proteins with the analyzed CPPs. A similar mechanism translocates across the plasma membrane.
[0307] The structural motif is as follows:
[0308]
[0309] Here, X refers to alanine (A), valine (V), leucine (L) or isoleucine (I); proline (P) can be located at one of U (5 ', 6', 7' or 8'). The remaining U consists of A, V, L or I and the P at 12' is proline.
[0310] In Table 9, general consensus sequence / structural motifs are provided as follows. The amino acid length of the...
Embodiment 2
[0311] Example 2. Construction of expression vectors for recombinant proteins fused with aMTD
[0312] Our newly developed technology allows us to expand our approach for making cell-permeable recombinant proteins. Design expression vectors for histidine-tagged CRA proteins fused to aMTD or r-peptides. To construct expression vectors for recombinant proteins, polymerase chain reaction (PCR) was designed to amplify each designed fusion to CRA aMTD or r-peptide.
[0313] The PCR reaction (100ng genomic DNA, 10pmol of each primer, 0.2mM dNTP mixture, 1× reaction buffer and 2.5U Pfu(+) DNA polymerase (Doctor protein, Korea)) in Nde I (5′) and Sal Restriction site digestion between I (3'), the PCR reaction includes denaturation (95°C), annealing (62°C) and extension (72°C) for 30 seconds each, 35 cycles in total. For the last extension cycle, the PCR reaction was held at 72°C for 5 minutes. Then, they were cloned into the sites of pET-28a(+) vector (Novagen, Madison, WI, USA). ...
Embodiment 3
[0314] Example 3. Inducible expression, purification and preparation of recombinant proteins fused to aMTD and r peptides
[0315] To express the recombinant protein, pET-28a for expression of CRA protein fused to negative control [r-peptide 38 (rP38)], reference hydrophobic CPP (MTM12 and MTD85) and aMTD was transformed in E. coli BL21(DE3) strain ( +) carrier. Cells were grown in LB medium containing kanamycin (50 μg / ml) at 37° C. with vigorous shaking and induced at OD600 = 0.6 by adding 0.7 mM IPTG (Biopure) for 2 hours at 37° C. . The induced recombinant proteins were loaded on a 15% SDS-PAGE gel and stained with Coomassie Brilliant Blue (InstantBlue, Expedeon, Novexin, UK) (Figure 3).
[0316] E. coli cultures were harvested by centrifugation at 5000 x rpm for 10 minutes and the supernatant discarded. The pellet was resuspended in lysis buffer (50 mM NaH 2 PO 4 , 10mM imidazole, 300mM NaCl, pH 8.0). Cell lysates were sonicated on ice using a sonicator (Sonics and M...
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