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Molecular marker for black rot of rape as well as acquisition method and application of molecular marker

A technology of molecular markers and molecular markers, applied in the field of molecular biology, can solve problems such as no fully immune varieties, no black rot, and no identified disease-resistant genes

Pending Publication Date: 2022-08-05
INST OF OIL CROPS RES CHINESE ACAD OF AGRI SCI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, at present, Brassica vegetables do not have sufficient resistance to black rot, there are no fully immune varieties and no major resistance genes have been identified, all of which greatly limit the progress of black rot resistance breeding
At present, there is a lack of available molecular markers in the process of identifying black rot resistance genes. The distribution density of molecular markers determines the size of the gene localization region. Therefore, it is urgent to develop black rot-related molecular markers for black rot resistance genes. gene mapping

Method used

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  • Molecular marker for black rot of rape as well as acquisition method and application of molecular marker
  • Molecular marker for black rot of rape as well as acquisition method and application of molecular marker
  • Molecular marker for black rot of rape as well as acquisition method and application of molecular marker

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0088] Example 1: Black rot pathogen inoculation and identification of resistant material ZS9mXccR-1

[0089] According to the normal growth conditions of rapeseed, 357 natural rapeseed varieties were collected in this laboratory through international and domestic cooperation in greenhouses (59 spring varieties, 255 semi-winter varieties, winter varieties 43; divided by geographical location, 257 Asian varieties, 60 European varieties, 16 Oceania, 13 South America, and 11 African and incomplete varieties), of which 41 were obtained by chemical mutagenesis and multi-generation self-breeding. . The 357 materials were thinned one week after germination, so that about 15 seedlings with strong growth were retained for each variety. Three biological replicates were set during inoculation, and each replicate was inoculated with 5 seedlings. When the seedlings grow to 3-4 unfolded leaves, start to prepare the bacterial solution for inoculation. First, the black rot Xcc bacteria were...

Embodiment 2

[0091] Example 2: Identification of other agronomic traits of resistant material ZS9mXccR-1

[0092] At the mature harvest stage of rapeseed, the resistant variety ZS9mXccR-1 and its source susceptible material ZS9 were copied for multiple traits. The result is as image 3 shown. All data in the figures are mean ± standard deviation of 3 biological replicates (10 plants per replicate). Asterisks indicate significant differences between the two lineages. It can be seen from the figure that the main inflorescence length and 1000-grain weight of the resistant variety ZS9mXccR-1 were significantly higher than those of the susceptible variety ZS9, indicating that the yield of the resistant variety ZS9mXccR-1 was better than that of the susceptible variety ZS9.

Embodiment 3

[0093] Example 3: Submicrostructural identification of the resistant material ZS9mXccR-1

[0094] Eight days after inoculation, leaf tissue at the junction of diseased and healthy was carefully cut into small squares of 3 × 3 mm and immediately fixed in a buffer solution (pH 7.2) containing 2.5% (v / v) glutaraldehyde and 0.1 M phosphate middle. The collected samples were then vacuumed until the blades sank to the bottom and were fully fixed. The fixed samples were sent to the electron microscope platform of the Institute of Virology, Chinese Academy of Sciences for subsequent processing and transmission electron microscope observation. The results are as follows: Figure 4 shown.

[0095] From the results of transmission electron microscopy, it can be seen that after 5 days of inoculation with black rot pathogenic bacteria, the susceptible material ZS9 has a slight plasmolysis of the mesophyll cells compared with the disease-resistant material ZS9mXccR-1, and a few chloroplas...

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Abstract

The invention discloses a molecular marker for black rot of rape as well as an obtaining method and application of the molecular marker. A rape black rot resistant material is inoculated and identified through a leaf cutting method, an F2 population of the rape black rot resistant material and a susceptible source material is constructed, a BSA-seq technology is adopted, a disease-resistant gene is primarily localized, and SNP and InDel molecular markers capable of being used for black rot resistant screening and gene localization are screened in the interval. The molecular marker comprises SNP molecular markers 1-9 and InDel molecular markers 1-4, a new molecular marker is provided for excavation and molecular breeding of rape black rot functional genes, and the molecular marker has an important application prospect for enhancing the resistance of rape to black rot.

Description

technical field [0001] The invention relates to the technical field of molecular biology, in particular to a molecular marker of rapeseed black rot and a method for obtaining and application thereof. Background technique [0002] Single Nucleotide Polymorphism (Single Nucleotide Polymorphism, SNP) widely exists in the genome of animals and plants. It is a DNA sequence polymorphism caused by the variation of a single nucleotide, including single base conversion, transversion, insertion and deletion. , is a new generation of molecular markers following microsatellite markers. Compared with microsatellite markers, SNPs have a large distribution density, a large number, and rich polymorphisms; low mutation rate, high stability and accuracy; no need to detect fragment length, only need to detect "yes or no" to determine polymorphisms, This makes it easy to automate screening. SNP markers have the following applications: 1) It can be used to study the association between genes a...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6895C12Q1/6811C12N15/11
CPCC12Q1/6895C12Q1/6811C12Q2600/13C12Q2600/156C12Q2535/122C12Q2537/165
Inventor 白泽涛杨黎刘胜毅赵传纪刘杰程晓辉刘越英刘立江黄军艳
Owner INST OF OIL CROPS RES CHINESE ACAD OF AGRI SCI