Expression Vector

a technology of expression vectors and vectors, applied in the field of expression vectors, can solve the problems of inadequacies in transcription, missing cofactors or chaperones, and incorrect protein folding

Inactive Publication Date: 2012-01-26
C LECTA GMBH
View PDF2 Cites 11 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Benefits of technology

[0019]Another object is to provide an expression system that is characterized by a high cloning efficiency linked to efficient, controllable expression.
[0024]It was found, surprisingly, that the expression vector according to the invention is particularly suitable for activity screening of (meta)genome libraries, as both directions of reading are covered. The loss of half of the sequence information contained in the (meta)genome library or the need to screen double the number of clones, as must be accepted when using conventional expression vectors, can be avoided by the expression vector according to the invention.

Problems solved by technology

Problems with the metagenome technique relate in particular to expression of the genes found.
These include inadequate transcription, for example because promoters are not recognized, toxicity of the products to the host, missing cofactors or chaperones and therefore incorrect folding of the proteins in the heterologous host, and missing secretion systems (W. R. Streit et al., Curr Opin Microbiol.
Owing to the weakness of the promoter or the non-recognition of non-E. coli promoters, some of the target proteins are barely expressed, or not at all, so that activity screening of the target proteins is far more difficult.
These limitations make iterative activity screening of sub-libraries (cluster screening, cf.
Instead, complicated and time-consuming activity screening with individual clones, e.g. on agar plates, is necessary.
Another problem in activity screening is that when constructing (meta)genome libraries it is not possible to influence the orientation of the open reading frame (ORF) on the cloned DNA.
In activity screening with conventional expression vectors, a large part of the sequence information contained in the (meta)genome library is therefore often lost because the promoter used only covers one of the two possible directions of reading.
In this system, however, the DNA to be cloned into the insertion sequence is not under the control of both promoters.
Such a system is hardly suitable for screening metagenome libraries, as only 50% of the sequence information contained is captured.
However, that method does not use a vector with promoters that are inducible separately from one another, and flow towards one another.

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Expression Vector
  • Expression Vector
  • Expression Vector

Examples

Experimental program
Comparison scheme
Effect test

example 1

[0194]The promoter strength of the ara or T7 promoter in pF2F4 was investigated in various situations using a reporter gene. The data show that pF2F4, in conjunction with the regulatory plasmid pLacI+(cf. FIG. 2) is optimum for use as the expression plasmid. The reporter gene used was an alcohol dehydrogenase (ADH), which was inserted in both possible orientations. The gene was under the control of the ara promoter or of the T7 promoter, respectively. Only the combination of regulatory plasmid encoded Lad and AraC with the pF2F4 plasmid leads to maximum possible expression starting from the Ara promoter and from the T7 promoter (FIG. 3).

[0195]The ara promoter activity is lowered in the BL21 strain with simultaneous T7 induction to approx. 10% of the initial activity (FIG. 4A). The possibility of this effect being based on competitive inhibition of the regulator AraC by IPTG can be ruled out, as the inhibition is only observed in E. coli BL21(DE3). No significant decline in ara promo...

example 2

Example of Application of pF2F4: Screening for Esterase / Lipase Activity in a Metagenome Bank

[0196]A metagenome library set up in pF2F4 was screened for esterase / lipase-activity, using the cluster screening method (Greiner-Stoeffele, T., Struhalla, M., 2005, WO 2004 / 002386). The hit rate was compared with that of a metagenome bank cloned into the conventional pUC-vector. The target activity was an activity that is readily detectable with an established enzyme assay, and whose occurrence in metagenome banks has been described sufficiently in the literature.

1. Preparation of the Metagenome Bank

[0197]For the metagenome banks used, metagenomic DNA (mgDNA) was isolated from the contents of a sheep's rumen by direct lysis (Zhou. J.; Bruns, M. A.; Tiedje, J. M. (1996): DNA recovery from soils of diverse composition. Appl. Environ. Microbiol; 62(2): 316-22). For preparing the metagenome bank in pF2F4, the mgDNA was then partially digested with the restriction enzyme AluI and ligated by stand...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to view more

PUM

PropertyMeasurementUnit
incubation timeaaaaaaaaaa
ODaaaaaaaaaa
catalytic activityaaaaaaaaaa
Login to view more

Abstract

An expression vector including two separately inducible converging promoters P1 and P2, and expression system including such an expression vector and an additional regulator vector, a method of protein expression using such an expression system, and a method of investigating (meta)genome libraries using such an expression system.

Description

CROSS REFERENCE TO RELATED APPLICATIONS[0001]This application is a continuation of international patent application no. PCT / EP2009 / 008977, filed Dec. 15, 2009, designating the United States of America, and published in German on Jul. 8, 2010 as WO 2010 / 075956, the entire disclosure of which is incorporated herein by reference. Priority is claimed based on European Patent Application no. EP 08021794.6, filed Dec. 16, 2008, which likewise is incorporated herein by reference.BACKGROUND OF THE INVENTION[0002]The invention relates to an expression vector that is suitable for efficient screening of (meta)genome libraries, preferably in Escherichia coli. [0003]Only about 1-5% of all known microorganisms are at present cultivable in the laboratory with current methods. Methods have been developed in recent times which should make it possible to use the genetic resources of non-cultivable microorganisms. This field is also called “metagenomics”, with the term “metagenome” denoting the geneti...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to view more

Application Information

Patent Timeline
no application Login to view more
Patent Type & Authority Applications(United States)
IPC IPC(8): C40B30/08C12P21/00C12N15/63
CPCC12N15/1082C12N15/635C12N2830/002C12N2800/40C12N15/70
Inventor GREINER-STOEFFELE, THOMASBALLSCHMITTER, MEIKESTRUHALLA, MARCCZAJA, RICO
Owner C LECTA GMBH
Who we serve
  • R&D Engineer
  • R&D Manager
  • IP Professional
Why Eureka
  • Industry Leading Data Capabilities
  • Powerful AI technology
  • Patent DNA Extraction
Social media
Try Eureka
PatSnap group products