Gene chip for detecting various prawn pathogenes and detection method thereof
A technology of gene chips and pathogens, which is applied in the field of gene chips and detection of various pathogens of prawns, and can solve the problems of high-throughput detection, poor accuracy, and low sensitivity
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Embodiment 1
[0062] Embodiment 1: the construction of gene chip
[0063] 1. Probe selection on the gene chip
[0064] (1) Determination of characteristic genes
[0065] For the quality control system and the common pathogenic microorganisms of prawns, the characteristic genes to be detected were determined by consulting relevant literature.
[0066] The quality control system is divided into 5 parts, namely surface chemical quality control, hybridization positive external control quality control, positive internal control quality control of the whole process monitoring, negative quality control and blank quality control. Among them, the surface chemical quality control uses the bovine β-actin gene as a characteristic gene, which is used to reflect whether there is a problem with the fixation of the nucleic acid on the film substrate; the hybrid positive external control quality control uses the bovine β-globin gene as a characteristic gene, and uses To monitor the hybridization step; the...
Embodiment 2
[0083] Example 2: Validation of the effect of the gene chip
[0084] 1. Validation of the effect of each quality control in the quality control system
[0085] The steps of using the above-mentioned gene chip detection method: (1) preparation of the sample to be tested, (2) digoxin-labeled PCR product, (3) pre-hybridization and hybridization, (4) adding alkaline phosphatase-labeled digoxin antibody, (5) Color development, (6) Interpretation of results; using the total gill DNA and calf thymus DNA of five shrimp species, Litopenaeus vannamei, Penaeus monodon, Penaeus chinensis, Penaeus japonicus, and Penaeum meji, as templates, for the detection of shrimp The surface chemical quality control QC1 of the gene chip of various pathogens, the hybridization positive external control quality control QC2, the internal control quality control QC3 of the whole process monitoring, and the primers and corresponding probes of the negative control quality control QC4 are verified.
[0086] ...
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