Bcr-Abl gene mutation detection liquid-phase chip
A bcr-abl, detection liquid technology, applied in the field of molecular biology, can solve the problems of high false positive rate, low sensitivity, easy contamination of samples, etc., and achieve the effects of simple steps, improved sensitivity, and strong scalability.
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Embodiment 1B
[0022] Embodiment 1 Bcr-Abl gene mutation detection liquid chip mainly includes:
[0023] 1. ASPE Primers
[0024] Specific primer sequences were designed for 16 common mutation sites of Bcr-Abl gene M244V, L248V, D276G, G250E, Y253F / H, E255K / V, T315I, F317L, E355G, F359V, V379I, H396P / R, F486S . ASPE primers consist of "Tag sequence + specific primer sequence". ASPE primer sequences are shown in the table below:
[0025] Table 1 ASPE primer sequence (Tag sequence + specific primer sequence)
[0026]
[0027]
[0028]
[0029] Each ASPE primer includes two parts, the 5' end is a specific tag sequence for the anti-tag sequence on the corresponding microsphere, and the 3' end is a mutant or wild-type specific primer fragment (as shown in the above table 1). All ASPE primers were synthesized by Shanghai Sangon Bioengineering Technology Service Co., Ltd. Each synthesized primer was prepared into a 100pmol / mL stock solution with 10mmol / LTris Buffer.
[0030] 2. Micro...
Embodiment 3
[0102] The detection of the Bcr-Abl gene mutation site by the liquid chip of embodiment 3 different ASPE primers
[0103] 1. Design of liquid phase chip preparation (selection of Tag sequence and Anti-Tag sequence)
[0104] Taking the Bcr-Abl gene M244V site mutation detection liquid chip as an example, the specific primer sequence of the 3' end of the ASPE primer was designed for the wild type and mutant type of M244, and the Tag sequence at the 5' end of the ASPE primer was selected from SEQ ID NO .1-SEQ ID NO.31, correspondingly, the anti-tag sequence coated on the microsphere and complementary to the corresponding tag sequence is selected from SEQ ID NO.63-SEQ ID NO.93. The specific design is shown in the following table (Table 7). The synthesis of ASPE primers, microspheres coated with anti-tag sequences, amplification primers, detection methods, etc. are as described in Example 1 and Example 2.
[0105] Table 7 Design of liquid phase chip preparation
[0106]
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