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Method for improving activity of pseudomonas aeruginosa elastase (PAE) by carrying out single-point mutation to delete salt bond in structure

A technology of site-directed mutagenesis and salt bond, applied in the field of genetic engineering method to improve enzyme activity, can solve problems such as in-depth analysis of salt bond effect, and achieve the effect of improving activity

Inactive Publication Date: 2013-12-18
BIOTECH RES CENT SHANDONG ACADEMY OF AGRI SCI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, based on the literature, it is found that there are very few studies on the activity and thermal stability of PAE, and the research on the activity and thermal stability of the model protease thermolysin, which has been studied more deeply in the M4 family, has not deeply analyzed the role of salt bonds.

Method used

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  • Method for improving activity of pseudomonas aeruginosa elastase (PAE) by carrying out single-point mutation to delete salt bond in structure
  • Method for improving activity of pseudomonas aeruginosa elastase (PAE) by carrying out single-point mutation to delete salt bond in structure
  • Method for improving activity of pseudomonas aeruginosa elastase (PAE) by carrying out single-point mutation to delete salt bond in structure

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Experimental program
Comparison scheme
Effect test

Embodiment 1

[0056] (a) Mutant primer design:

[0057] Primer design was completed using Primer Premier 5.0 software. Primers were synthesized at Huada Genetics (BGI).

[0058] Primers at both ends:

[0059] Forward primer: GCTTGGAC CATATG AAGAAGGTTTCTACGCTTGACC, the dashed part indicates the Nde I restriction site.

[0060] Reverse primer: CGCG CTCGAG TTACAACGCGCTCGGGCAG, the underlined part indicates the Xho I restriction site.

[0061] D201A intermediate primer:

[0062] 3’ Primer: GCGCTGCGCTACATGGCGCAGCCCAGCCGCGAC

[0063] 5’ Primer: GCGGCTGGGCTGCGCCATGTAGCGCAGCGCACCG

[0064] R205A intermediate primer:

[0065] 3’ Primer: GACCAGCCCAGCGCGGACGGGCGATCCATC

[0066] 5' end primer: GGATCGCCCGTCCGCGCTGGGCTGGTCCATG.

[0067] Example 2

[0068] The prokaryotic expression of the above mutants is:

Embodiment 2

[0070] ① Use the forward primer containing the Nde I restriction site and the 3' primer of the intermediate primer of the mutant as the primers at both ends, and lasB The plasmid was used as a template, and the amplified product was marked as Ⅰ; the reverse primer containing the Xho I restriction site and the 5' primer of the intermediate primer of the mutant were used as primers at both ends, and lasB The plasmid was used as a template, and the amplified product was marked as II;

[0071] ② Recover Ⅰ and Ⅱ through PCR reaction procedure: 98 o C denatured 30 sec; 98 o C denatured 10 sec; 60 o C Annealing 30 sec; 72 o C extension 1 min, 7 cycles, 72 o Incubate at C for 7 minutes to fuse the genes Ⅰ and Ⅱ;

[0072] ③ Finally, add the forward and reverse primers on both sides and go through the PCR reaction program: 98oC denaturation for 30 sec; 98oC denaturation for 10 sec, 60oC annealing for 30 sec, 72oC extension for 1 min, 30 cycles; 98oC denaturation for 10 sec; 72oC ex...

Embodiment 3

[0076] ②Digest the DNA with restriction endonucleases NdeI and XhoI, and connect the pET-22b expression vector that has been digested with the same enzymes;

[0077] ③Connection product conversion E. coli DH5α, The transformation method refers to "Molecular Cloning Experiment Guide" (Third Edition) (Volume 1) (Sambrook et al., 2002);

[0078] ④Pick the transformants from the transformation plate and culture them in liquid LB medium, and select the transformants carrying the target gene by the method of plasmid extraction and verification;

[0079] ⑤Transform the sequenced correct plasmid containing the target gene E. coli BL21(DE3) ;

[0080] ⑥Pick a single colony of the transformant from the plate into a 5 ml liquid LB test tube, culture overnight at 37??C, transfer it to a fresh 30 ml liquid LB Erlenmeyer flask with 1% inoculum, and culture at 37??C until OD 600 =1.0 Add IPTG with a final concentration of 1 mM and continue culturing overnight;

[0081] ⑦ Collect the b...

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Abstract

The invention provides a method for improving activity of pseudomonas aeruginosa elastase (PAE) by carrying out single-point mutation to delete salt bond in structure. By adopting a site-directed mutagenesis technology, an Asp201 in Asp201-Arg205 for forming the salt bond 3 is mutated into Ala by deleting a single salt bond near a catalytic cavity; a mutant D201A is built, so as to improve the activity of the PAE. The method has significance on revelation of the structure and the functional relationship of M4 family metal proteases; meanwhile, a plurality of M4 family metal proteases are important medical and industrial enzymes, therefore, the method has an important guiding significance on molecular modification research and development of related new products of the family proteases.

Description

technical field [0001] The invention relates to the technical field of improving enzyme activity by genetic engineering methods, in particular to a method for improving PAE enzyme activity through single point mutation deletion of salt bonds in structures. Background technique [0002] Proteases (peptidases, proteases, proteinases or proteolytic enzymes) are a class of enzymes that can catalyze the hydrolysis of peptide bonds in proteins or peptides. [0003] Elastin is widely found in animal tissues, such as elastic tissues, lungs, large arteries, certain ligaments, skin and ear cartilage. Elastin is composed of multiple tropoelastin polypeptide chains connected by covalent cross-links (Yeo et al., 2011), has a very stable structure, and does not contain amino acids and cleavage sites recognized by common proteases , so that elastin can only be broken down by elastase. The protease that can hydrolyze elastin is called elastase. [0004] According to the source, elastase ...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N9/66C12N15/57C12N15/70
Inventor 边斐毕玉平彭振英杨连群于金慧宣宁张燕
Owner BIOTECH RES CENT SHANDONG ACADEMY OF AGRI SCI