Symmetrical-terminals antibacterial peptide PP and preparation method and application thereof
An antibacterial peptide, symmetrical technology, applied in the field of terminal symmetric antibacterial peptide PP and its preparation and application, can solve the problems of low cell selectivity, high hemolytic activity and toxicity
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Embodiment 1
[0017] Design of Antimicrobial Peptides
[0018] Symmetric-terminal antimicrobial peptides were designed by embedding β-turns within two symmetrical α-helical units. First, amino acids of different structural types are selected, including hydrophobic amino acids Ile, Phe and Trp; positively charged amino acids His, Lys and Arg, and an α-helix combined six-membered residue (IHKFWR) with high hydrophobicity and perfect amphipathic structure is designed, Then, the amino acid sequence CRRRFC of the β-turn position of the porcine antimicrobial peptide Protegrin-1 (PG-1) was embedded in two α-helical monomers to form a terminally symmetrical antimicrobial peptide.
[0019] Amino acid sequence of table 1 terminal symmetrical antimicrobial peptide
[0020]
[0021] The charge number of PP is +7, and the hydrophobic value is 0.49 respectively. The porcine antimicrobial peptides Protegrin-1 (PG-1) and PP were amidated at the carboxyl terminals to increase a positive charge and incr...
Embodiment 2
[0023] PP was synthesized by solid-phase chemical synthesis.
[0024] 1. The preparation of antimicrobial peptides is carried out one by one from the C-terminal to the N-terminal, and is completed by a peptide synthesizer. First, Fmoc-X (X is the first amino acid at the C-terminal of each antimicrobial peptide) is inserted into Wang resin, and then the Fmoc group is removed to obtain X-Wang resin; then Fmoc-Y-Trt-OH (9 -Fmoxy-trimethyl-Y, Y is the second amino acid at the C-terminus of each antimicrobial peptide); according to this procedure, it is synthesized from the C-terminus to the N-terminus until the synthesis is completed, and the side of the Fmoc group is removed chain protection resin;
[0025] 2. Add a cleavage reagent to the peptide resin obtained above, react for 2 hours at 20°C in the dark, filter; wash the precipitate with TFA (trifluoroacetic acid), mix the washing liquid with the above filtrate, concentrate with a rotary evaporator, and then add 10 times Abo...
Embodiment 3
[0029] Determination of antimicrobial activity of antimicrobial peptides
[0030] 1. Determination of antibacterial activity: Prepare the peptide as a storage solution for use. The minimum inhibitory concentrations of several antimicrobial peptides were determined by the broth microdilution method. Using 0.01% acetic acid (containing 0.2% BSA) as the diluent, a series of gradient antimicrobial peptide solutions were sequentially prepared using the double dilution method. Take 100 μl of the above solution and place it in a 96-well cell culture plate, then add an equal volume of the bacteria solution to be tested (~10 5 pc / ml) in each well. Positive controls (containing bacterial fluid but not antimicrobial peptides) and negative controls (neither bacterial fluid nor peptides) were set up. Incubate at a constant temperature of 37°C for 20 hours, and the minimum inhibitory concentration is the one where no turbidity is seen at the bottom of the well with the naked eye. The te...
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