Looking for breakthrough ideas for innovation challenges? Try Patsnap Eureka!

Susceptible gene chip used for detecting type II diabetes associated with organophosphorus pesticides

An organophosphorus pesticide and susceptibility gene technology, applied in the field of gene detection, can solve the problems of difficult clinical diagnosis of diabetes, cannot be used as a targeted therapy, long operation time, etc., achieve a good application market and economic benefits, and good consistency of fluorescence intensity. , the effect of simple operation

Inactive Publication Date: 2018-05-08
XUZHOU UNIV OF TECH
View PDF3 Cites 0 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0005] Diabetes susceptibility gene detection methods generally use PCR-RFLP and DNA sequencing methods in the past, but there are certain shortcomings, such as long operation time, cumbersome steps, easy missed detection, and not suitable for batch, multi-locus, special structural sequence detection, etc. Difficulties in the clinical diagnosis of diabetes
At present, there is still a lack of type 2 diabetes susceptibility gene detection chip related to organophosphorus pesticides. There is no correlation between the existing type 2 diabetes susceptibility gene detection gene chip and type 2 diabetes caused by long-term exposure to organophosphate pesticides. Basis for selection of targeted therapy drugs

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Susceptible gene chip used for detecting type II diabetes associated with organophosphorus pesticides
  • Susceptible gene chip used for detecting type II diabetes associated with organophosphorus pesticides
  • Susceptible gene chip used for detecting type II diabetes associated with organophosphorus pesticides

Examples

Experimental program
Comparison scheme
Effect test

preparation example Construction

[0033] Such as figure 2 As shown, the preparation method of the susceptibility gene chip for detecting type II diabetes related to organophosphorus pesticides provided by the embodiments of the present invention comprises the following steps:

[0034] S101: The glass is pretreated as a solid phase carrier after aldehyde modification;

[0035] S102: The probe preparation method is that the 5' end of the probe contains 15 amino-modified poly-dTs, which are modified by amino groups, and then diluted with TE solution at a ratio of 1:1 to a final concentration of 25 μM;

[0036] S103: Wash the sampling needle of the spotting instrument with PBS solution, and calibrate; the primer sequences used to amplify the four susceptibility gene mutation sites are SEQ ID NO: 1-8, and the amplified regions are SEQ ID NO: 11-18 As shown, the nucleotide sequence of the specific oligonucleotide probe is used as the oligonucleotide probe, and the diluted oligonucleotide probe is printed on the so...

Embodiment 1

[0048] The embodiment of the present invention screens people who have long-term contact with organophosphorus pesticides. According to the susceptibility genes of type Ⅱ diabetes, meta-analysis method is used to classify and count each susceptibility gene, calculate the OR value, and calculate the correlation with long-term contact with organophosphorus pesticides. susceptibility loci. Taking the C677T gene locus of MTHFR as an example, the data of the susceptible group and the control group with long-term exposure to organophosphorus pesticides, and the susceptible group with no exposure history and the control group were collected. After analysis by reviewmanager 5 software, the results showed that the locus was OR The value is 2.03, which is greater than 1, so this site is a risk factor for the susceptible population exposed to organophosphorus pesticides for a long time.

[0049] The gene chip in the embodiment of the present invention includes a solid phase carrier and a...

Embodiment 2

[0054] The detection method of the susceptibility gene locus provided by the embodiment of the present invention specifically includes the following steps:

[0055] 1. Sample DNA Extraction

[0056] After collecting venous blood in vacuum blood collection tubes anticoagulated with ethylenediaminetetraacetic acid (EDTA) according to conventional methods, genomic DNA was extracted using a blood genomic DNA extraction kit (QIAamp DNAMini Blood Kit, Qiagen), and the sample was diluted to 10 ng with double distilled water. / mL.

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

No PUM Login to View More

Abstract

The invention belongs to the technical field of gene detection and discloses a susceptible gene chip used for detecting type II diabetes associated with organophosphorous pesticides. The susceptible gene chip includes a stationary phase carrier made of aldehyde-based glass and specific oligonucleotide probes used for detecting type II diabetes susceptible genes associated with organophosphorus pesticide residues; nucleotide sequences of the specific oligonucleotide probes are shown as SEQ ID NO: 1 to SEQ ID NO: 8, and the probes are fixed to the stationary phase carrier. A complementary base specific hybridization method is utilized to achieve high-throughput detection; the operation is simple; after labeling is conducted by fluorescent dye, films are washed, a detection result is obtainedthrough a fluorescence scanner, coloration is not needed, the detection is rapid, the cost is low, and a trace reaction system is achieved. The detection result shows that the false positive rate is3.25% and the false negative rate is 1.05%. The susceptible gene chip has a great application market and economic benefits and is easy to apply on a large scale.

Description

technical field [0001] The invention belongs to the technical field of gene detection, in particular to a susceptibility gene chip for detecting type II diabetes related to organophosphorus pesticides. Background technique [0002] Diabetes is a common endocrine and metabolic disease characterized by chronic hyperglycemia. The most common type is type II diabetes, accounting for about 90% of the total number of diabetes. The etiology and pathogenesis of type Ⅱ diabetes are complex, and it has obvious genetic susceptibility. It is currently considered to be a multifactorial disease caused by the participation and interaction of multiple risk factors such as genetics, environment, and behavior. In recent years, with the completion of the Human Genome Project and the establishment of high-throughput single nucleotide polymorphism (single nucleotide polymorphism, SNP) detection gene chips, a series of susceptibility genes related to type 2 diabetes have been discovered. So far,...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6883
CPCC12Q1/6883C12Q2600/156
Inventor 董玉玮张传丽李文王陶李同祥高明侠
Owner XUZHOU UNIV OF TECH
Who we serve
  • R&D Engineer
  • R&D Manager
  • IP Professional
Why Patsnap Eureka
  • Industry Leading Data Capabilities
  • Powerful AI technology
  • Patent DNA Extraction
Social media
Patsnap Eureka Blog
Learn More
PatSnap group products