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A kind of method and application for gene editing of Agaricus bisporus

A Agaricus bisporus gene editing technology, applied in the field of gene editing systems, can solve the problems of Agaricus bisporus breeding restrictions, inability to obtain homozygotes, lack of endogenous expression promoters of Agaricus bisporus, etc., and achieve high editing efficiency

Active Publication Date: 2020-11-17
湖北索敢科技有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

In edible fungi, there are still no successful reports on the application of CRISPR / Cas9 technology, especially in Agaricus bisporus, mainly because of the following problems: (1) Lack of effective Agaricus bisporus Endogenous expression promoter, driving the expression of gRNA and Cas9 protein in Agaricus bisporus hyphae
(2) Agaricus bisporus produces basidiomycetes, and homozygotes cannot usually be obtained by traditional homologous recombination methods, so the existing technology has great limitations in the breeding of Agaricus bisporus
(3) At present, there is no established gene editing technology of Agaricus bisporus at home and abroad

Method used

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  • A kind of method and application for gene editing of Agaricus bisporus
  • A kind of method and application for gene editing of Agaricus bisporus
  • A kind of method and application for gene editing of Agaricus bisporus

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Experimental program
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Effect test

Embodiment 1

[0051] Embodiment 1, Agaricus bisporus mycelia culture.

[0052] 1.1 Configuration of medium

[0053] The medium used in the present invention includes: improved PDA medium; minimal medium (MM); induction medium (IM); co-cultivation medium (CM); screening medium (MMP); Medium configuration:

[0054] Improved PDA medium: use an electronic balance to accurately weigh 2 g of yeast extract, 2 g of peptone, 0.5 g of magnesium sulfate, 1 g of dipotassium hydrogen phosphate, 0.46 g of potassium dihydrogen phosphate, 20 g of glucose, and 18 g of agar in a beaker, add water to 1 L and stir well.

[0055] Minimal medium (MM): Take 10 mL K-buffer [262 g / L dipotassium hydrogen phosphate, 145 g / L potassium dihydrogen phosphate (pH 7.0), 20 mL M-N (30 g / L magnesium sulfate, 15 g / L L sodium chloride), 1 mL 0.75% calcium chloride, 10 mL 21.8% glucose, 10 mL 0.018% ferrous sulfate, 5 mL trace elements (100 mg / L zinc sulfate, 100 mg / L copper sulfate, 100 mg / L Boric acid, 100 mg / L manganese ...

Embodiment 2

[0073] Embodiment 2, transcribing gRNA and expressing the vector construction of Cas9 protein

[0074] 2.1 Acquisition of human homologous U6 gene promoter

[0075] According to the coding sequence analysis of the Agaricus bisporus genome, the gene sequence homologous to the human U6 gene in Agaricus bisporus was obtained by BLAST comparison, and the only gene sequence of Agaricus bisporus homologous to the human U6 gene was found and named as AbU6 gene. Then the 500 bp sequence before its transcription start site was taken out as its promoter sequence, and named as P AbU6 , the sequence is shown in SEQ ID NO:1.

[0076] 2.2 Cloning of highly expressed U6 promoter of Agaricus bisporus

[0077] Primers are:

[0078] U6-F: GACCTGCAGGTACCCCGTGTATGATTGGTAC

[0079] U6-R: ACCGAGACCTCGGTCTCTCAATAGTTAACAGCGTGGATC

[0080] The PCR system is: high-fidelity enzyme 2 μL; primers 2 μL; water 35 μL; DNA template 2 μL; PCR buffer 5 μL; dNTP 2 μL.

[0081] The PCR reaction conditions...

Embodiment 3

[0131] Embodiment 3, Agaricus bisporus AbPPO4 Acquisition of positive hyphae transformed by gene mutation

[0132] 3.1 Acquisition of Agrobacterium:

[0133] 3.1.1. Preparation of Agrobacterium LBA4404 Competent Cells:

[0134] (1) Four Agrobacterium strains LBA4404 were taken, and cultured in a 28 C incubator for 30 hours after streaking. In order to ensure that there was no contamination by bacteria, a single colony was picked and cultured overnight.

[0135] (2) Take 10 μL as the seed and expand the culture until the OD600 is equal to 0.5 (about 27h).

[0136] (3) Put the bacterial solution in an ice bath for 30 min, pre-cool the centrifuge during this period, then centrifuge to remove the supernatant, and upside down on absorbent paper to absorb the culture solution.

[0137] (4) Use pre-cooled 25 mL, 0.1 mol / L CaCl 2 Resuspend the cells in the solution and place in ice bath for 20 min.

[0138] (5) Centrifuge at 4 C, 4000 rpm for 10 min, and discard the supernatant. ...

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Abstract

The invention discloses a gene editing method and application of Agaricus bisporus. The present invention analyzes the Agaricus bisporus sequence, obtains the human homologous U6 promoter sequence, constructs a CRISPR / Cas9 vector capable of efficiently expressing Cas9 protein and gRNA, and establishes a set of genes for precise editing of the Agaricus bisporus gene Editing system. The test results of the present invention show that the Agaricus bisporus gene editing system established by the present invention can successfully and efficiently edit the Agaricus bisporus gene AbPPO4 Do gene editing. The gene editing technology invented in the present invention can precisely and directionally edit the gene of Agaricus bisporus, and can be used in the breeding, improvement and research of Agaricus bisporus.

Description

technical field [0001] The invention relates to a set of gene editing system for Agaricus bisporus and its application. Background technique [0002] Agaricus bisporus ( Agaricus bisporus ), also known as white mushroom, Tricholoma, etc., is the most widely cultivated edible fungus with the largest output and consumption in the world, and it is also my country's largest export-earning edible fungus. The fruiting body of Agaricus bisporus is rich in protein and 18 kinds of amino acids, 8 of which are essential amino acids for the human body. It is delicious, low in fat and low in calories, and is known as "plant meat" and is popular all over the world. At present, according to the statistics of The International Society for Mushroom Science (ISMS), Agaricus bisporus is one of the most widely cultivated mushrooms in the world. The total output of Agaricus bisporus in the world is 4.83 million tons. The output of mushrooms is 2.505 million tons, ranking first in the world and...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12N15/80C12N15/90C12N15/65C12N15/10C12N15/53
CPCC12N9/0059C12N15/102C12N15/65C12N15/80C12N15/902C12Y110/03001
Inventor 沈祥陵吕阳王佩韩少鹏曾弓剑周超刘文
Owner 湖北索敢科技有限公司