Novel thrombase-like gene and its use
A thrombin-like and gene technology, applied to new thrombin-like genes and their application fields, can solve the problems of shortage of snake resources, low product purity, restricting the research and utilization of enzyme components, etc.
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Embodiment 1
[0035] Example 1: Extraction and RT-PCR amplification of total RNA from Agkistrodon venom gland
[0036] Extraction of total RNA and synthesis of cDNA: The total RNA of the venom gland of Agkistrodon akistrodon was extracted by one-step hot phenol method, and the protein was removed by extraction. To obtain a total RNA concentration of 3.9 μg / μl, its A 260 / A 280 =1.9, two clear bands of 18s and 28s can be seen by 1% agarose electrophoresis (see Figure 2), indicating that the integrity of the total RNA is good. Take 1ug of total RNA with SMART III olignuclotide (5'-AAGCAGTGGTATCAACGCAGAGTGGCCATTATGGCCGGG-3') and CDSIII / 3'PCR primers (5'-ATTCTAGAGGCCGAGGCGGCCGACATG-d(T) 30 N -1 Each 1ul of N-3′) was reverse-transcribed to synthesize the first strand to obtain 10 μl of cDNA first-strand product. 2μl of the first-strand product was washed with 5’PCR primer (5’-AAGCAGTGGTATCAACGCAGAGT-3’), CDS III / 3’PCR primer (5’-ATTCTAGAGGCCGAGGCGGCCGACATGd(T) 30 N -1 N-3') for second stra...
Embodiment 2
[0037] Example 2: Sequence analysis of the thrombin-like gene in the venom gland of Agkistrodon akistrodon
[0038] Blast homology analysis showed that the nucleotide sequence of the new thrombin-like gene of Agkistrodon venom gland shared 87% with a serine protease from Trimeresurus gramineus and a stejnobin sequence from Trimeresurus stejnegeri in China. Homology, 86% homology with American lancehead Agkistrodon (Bathrops jararaca). The protein sequence of TLE has the highest homology (72%) with the amino acid sequence encoded by stejnobin of Chinese bamboo leaf green snake (Trimeresurus stejnegeri). The homology of the enzyme gene is not the highest, and among the 13 thrombin-like genes reported by Agkistrodon acutobin, it has the highest homology (68%) with Acutobin precursor (Acutrombin / Acutase). The TLE amino acid sequence has the typical characteristics of thrombin-like enzymes from other snake venoms, and contains a catalytic triplet conserved in serine proteases: His...
Embodiment 3
[0039] Example 3: Construction of Yeast Secreted Expression Plasmid of Agkistrodon Agkistrom-like Thrombin
[0040] A pair of primers were synthesized according to the sequences at both ends of the tle gene, the upstream primer contained the Xho I cleavage site, and the downstream primer contained the NotI cleavage site.
[0041] Upstream primer (B1):
[0042] -CCG CTCGAGAAAAGAGAGGCTGAAGCTGTCATTGGAGGTAATGAATGTAAC -
[0043] Xho I 3'end ofα-Factor signal sequence Mature TLE
[0044] Downstream primer (B2):
[0045] -TGC TCTAGA TAACTTCTTCAAAAGTTTCACGG
[0046] The pcDNA3.0 plasmid containing the tle gene was used as a template, and B1 and B2 were used as primers for PCR amplification, and a single specifically amplified band was obtained, and the product size was about 122 bp (Figure 3). The PCR was about 800 bp, and the amplified product was digested with XhoI / NotI and cloned into the Pichia pastoris expression vector pPICZαA to obtain the recombinant expression vector p...
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