Gene-encoded nicotinamide adenine dinucleotide fluorescent probe and its preparation method and application

A fluorescent probe and nucleotide sequence technology, applied in the ratio of NAD+ and NADH/NAD+, recombinant fluorescent fusion protein detection probe, preparation of the above-mentioned detection probe, detection of NADH field, can solve the problem that cannot be applied to live animals Or cells, NAD(H) measurement inconvenience, NADH easy to oxidize and other problems

Active Publication Date: 2017-06-23
EAST CHINA UNIV OF SCI & TECH
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

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Problems solved by technology

[0004] However, the total amount of NAD(H) in most living cells is about 10 -6 M~10 -3 M, and NAD + The ratio of NADH / NADH also varies with different intracellular states (Lin, S.J. et al., Current Opinion in Cell Biology.2003, V.15(2), pp.241-246), so this gives the NAD(H) The measurement has brought great inconvenience
The earlier detection method is mainly based on the characteristic absorption of NADH in the 340nm ultraviolet region, thus establishing the ultraviolet spectrophotometric method. There are two main defects in this method: 1. The effective sensitivity is limited by the precision of the instrument, which is about 10 -7 M; 2. In a complex system, NADH and NADPH cannot be effectively distinguished
However, most methods either have insufficient sensitivity for target molecules in single cells or cannot perform subcellular organelle localization
In particular, it should be pointed out that there is a major defect in these existing methods, that is, the sample needs to be cracked, separated, purified, etc., and NADH itself is extremely easy to oxidize, and errors are easily introduced in a series of tedious operations. , resulting in discrepancies between the final displayed results and the actual
In addition, these existing methods cannot be applied to living animals or cells, and cannot be detected in real time, which limits the application of these methods in the fields of clinical disease diagnosis and drug precursor research.
At present, only NADH autofluorescence can be used to detect in vivo or cells (Zhang, Q.H. et al., Science.2002, V.295(5561), pp.1895-1897), and this traditional method has the following serious defects: first, NAD + / NADH and NADP + The regulation of / NADPH is relatively independent. Under normal conditions, NAD + The ratio of / NADH is about 700:1, while the ratio of NADP+ / NADPH is 1:200; secondly, there is a huge difference in their redox potentials, which reflects that NADH and NADPH play distinct roles in energy metabolism and anabolism, respectively. Different roles; third, NADH is completely indistinguishable from NADPH autofluorescence, and the result obtained by imaging measurements using autofluorescence is the sum of NADH and NADPH, given that NADH content is very low and mostly exists in protein-bound form, so NADH autofluorescence The data essentially reflect the concentration of protein-bound NADPH (Zhang, Q.H. et al., Science.2002, V.295(5561), pp.1895-1897); Fourth, since the excitation wavelength of NADH is in the ultraviolet region (340nm) and spontaneous Fluorescence is weak, requiring complex and expensive instruments such as CritiView for clinical monitoring, coupled with the weak penetration of ultraviolet light into tissues and causing cell damage, these optical characteristics severely restrict the application of autofluorescence monitoring

Method used

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  • Gene-encoded nicotinamide adenine dinucleotide fluorescent probe and its preparation method and application
  • Gene-encoded nicotinamide adenine dinucleotide fluorescent probe and its preparation method and application
  • Gene-encoded nicotinamide adenine dinucleotide fluorescent probe and its preparation method and application

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0113] Example 1pRSET b Construction and expression of -ydiH(189)-YFP-ydiH(190)

[0114] 1. Amplify the nucleic acid sequence of cpYFP:

[0115] Using pMD19-cpYFP as a template, use primers cpYFP F and cpYFP R to amplify the coding sequence of yellow fluorescent protein (cpYFP). The primer sequence (primers were synthesized by Shanghai Sangon Bioengineering Co., Ltd. (Shanghai, China)) is as follows:

[0116] P1: PstI GAAT CTGCAG GCTACAACAGCCACAACGTCTATATC (SEQ ID NO: 29)

[0117] P2: KpnICCAAGCTTCGG GGTACC GTTGTACTCCAGCTTGTG (SEQ ID NO: 30)

[0118] The PCR reaction system is

[0119]

[0120] The PCR reaction conditions are:

[0121]

[0122] The PCR amplification product was electrophoresed in 1% agarose gel for 20 minutes to obtain a cpYFP fragment of about 750bp. The cpYFP fragment was recovered and purified from the gel using the Shanghai Sangon DNA Fragment Recovery and Purification Kit (Shanghai Bioengineering Co., Ltd., Shanghai, China) according to the...

Embodiment 2

[0159] Example 2. ydiH(189)-YFP-ydiH(190) derived series probes

[0160] Probe construction principle

[0161] construct pRSET using b The intermediate transition plasmids of -ydiH(189)-YFP-ydiH(190) and other probes were used as templates, and the derivative series of probes were constructed according to the principle of site-directed mutagenesis.

[0162] Construction of mutant library

[0163] 1. Primer design (Shanghai Sangong)

[0164]

[0165]

[0166] 2. PCR amplification

[0167] Truncation and site-directed mutagenesis were performed using site-directed mutagenesis PCR.

[0168] Mutant PCR amplification system (primers, enzymes, dNTPs, etc. are from Fuzyces Co.):

[0169]

[0170] 3. Separation and purification of DNA fragments

[0171] DpnI digestion

[0172] Firstly, the above PCR amplified fragment was treated at 37°C for 3 hours with DpnI enzyme (from Fuzyces Co., Ltd.) in order to remove potential template plasmid contamination. Then, the reactio...

Embodiment 3

[0182] Example 3 Fluorescent Probes for the Ratio of Reduced and Oxidized Nicotinamide Adenine Dinucleotide Determination of Changes in NADH / NAD+ Ratio

[0183]The structure of the reduced and oxidized nicotinamide adenine dinucleotide ratio fluorescent probe is that cpYFP is inserted between the amino acids F189 and L190 of Trex. The sequence of this probe is SEQ ID NO: 148, and the preparation method is the same as Example 2. The probe is only for NADH and NAD + There is a response, but there is no response to NADH analogues. When using 485nm excitation, it can be found that the combination of NAD and NADH can lead to the enhancement of the 528nm emission fluorescence of the probe, but using 420nm excitation, only the combination of NADH can cause the probe to respond. Since the probes are excited at 420nm and 485nm, both can emit fluorescence at 528nm, so using different wavelengths of fluorescence excitation, measuring the intensity ratio (420nm / 485nm) of the two emission...

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Abstract

The invention relates to a fluorescent probe encoded by nicotinamide adenine dinucleotide gene and its preparation method and application. On the one hand, the present invention relates to a detection probe for nicotinamide adenine dinucleotide, in particular to a detection probe for a recombinant fluorescent fusion protein of nicotinamide adenine dinucleotide. In one specific aspect, the present invention relates to a recombinant fluorescent fusion protein detection probe of reduced nicotinamide adenine dinucleotide (NADH); in another specific aspect, the present invention relates to oxidized nicotinamide adenine dinucleotide (NADH) NAD+) recombinant fluorescent fusion protein detection probe; In yet another aspect, the present invention relates to a recombinant fluorescent fusion protein detection probe for the ratio of reduced and oxidized nicotinamide adenine dinucleotides. The present invention also relates to the preparation method of the above detection probe and its application in detecting NADH, NAD+ and NADH / NAD+ ratio respectively.

Description

[0001] This application is the application number 201110288807.6, the application date is September 26, 2011, and it is a divisional application of the invention patent application named "nicotinamide adenine dinucleotide gene-encoded fluorescent probe and its preparation method and application". The entire content of the parent case is hereby incorporated by reference in its entirety for all purposes. technical field [0002] The invention relates to a detection probe for nicotinamide adenine dinucleotide, in particular to a detection probe for a recombinant fluorescent fusion protein of nicotinamide adenine dinucleotide. In one specific aspect, the present invention relates to a recombinant fluorescent fusion protein detection probe of reduced nicotinamide adenine dinucleotide (NADH); in another specific aspect, the present invention relates to oxidized nicotinamide adenine dinucleotide (NADH) NAD+) recombinant fluorescent fusion protein detection probe; In yet another aspec...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C07K19/00C12N15/62C12N15/70C12N1/21C12Q1/02G01N21/64
Inventor 杨弋赵玉政呼庆勋
Owner EAST CHINA UNIV OF SCI & TECH
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