Method for detecting L-trpyptophan based on rolling circle amplification technology
A rolling circle amplification technology, rolling circle amplification technology, applied in the field of detection of L-tryptophan based on rolling circle amplification technology, can solve the problems of cumbersome operation, human error, high requirements for equipment maintenance and standardization, and achieve operational Simple, easy-to-step effects
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Embodiment 1
[0026] The present invention quantitatively measures the relationship between L-Trp concentration and RCA inhibitory rate ( image 3 ). Specific steps are as follows:
[0027] (1) Preparation of the ring template:
[0028] Prepare 10 μl of ligation reaction system buffer (50mM Tris pH 8.0, 10mM MgCl 2 , 5mM DTT and 0.1mM ATP), add 10pmol linear single-stranded template DNA "ON-CT", 10pmol linear single-stranded primer DNA "ON-P" and 175U T4 DNA ligase, and incubate at 16°C for 1 hour. See Table 1 for the DNA sequence.
[0029] (2) Preparation of samples:
[0030] Prepare L-tryptophan aqueous solutions with molar concentrations of 0, 5, 10, 20, 40, 60 and 80 μM.
[0031] (3) Rolling circle amplification detection:
[0032] Prepare 100 μl of polymerization reaction system buffer (50mM Tris pH 7.5, 10mM MgCl 2 , 10mM (NH 4 ) 2 SO 4 , 4mM DTT, SYB Green II (1:10000), 3U phi29DNA polymerase, 0.5pmol ligation reaction product and trpR2.5μM), add different amounts of L-Trp ...
Embodiment 2
[0037] The present invention specifically identifies L-Trp and other 19 kinds of amino acids ( Figure 4 ) The specific steps are as follows:
[0038] (1) Preparation of the ring template:
[0039] Prepare 10 μl of ligation reaction system buffer (50mM Tris pH 8.0, 10mM MgCl 2 , 5mM DTT and 0.1mM ATP), add 10pmol linear single-stranded template DNA "ON-CT", 10pmol linear single-stranded primer DNA "ON-P" and 175U T4 DNA ligase, and incubate at 16°C for 1 hour. See Table 1 for the DNA sequence.
[0040] (2) Preparation of samples:
[0041] Preparation molar concentration is the aqueous solution of the L-tryptophan of 80 μ M, and the preparation molar concentration is glycine (Gly), L-alanine (L-Ala), L-isoleucine (L-Ile), L-leucine ( L-Leu), L-methionine (L-Met), L-valine (L-Val), L-arginine (L-Arg), L-histidine (L-His), L-lysine (L-Lys), L-aspartic acid (L-Asp), L-glutamic acid (L-Glu), L-asparagine (L-Asn), L-glutamine (L-Gln), L-serine ( L-Ser), L-threonine (L-Thr), L-...
Embodiment 3
[0048] The present invention qualitatively identifies L-Trp and six kinds of L-Trp analogs ( Figure 5 ). Specific steps are as follows:
[0049] (1) Preparation of the ring template:
[0050] Prepare 10 μl ligation reaction system buffer (50mM Tris pH 8.0, 10mM MgCl 2 , 5mM DTT and 0.1mM ATP), add 10pmol linear single-stranded template DNA "ON-CT", 10pmol linear single-stranded primer DNA "ON-P" and 175U T4 DNA ligase, and incubate at 16°C for 1 hour. See Table 1 for the DNA sequence.
[0051] (2) Preparation of samples:
[0052] Preparation molar concentration is the aqueous solution of L-tryptophan of 80 μ M, preparation molar concentration is L-kynurenine (L-Kynurenine), indole acetic acid (IAA), melatonin (Melatonin), 5-hydroxytryptamine (5- HT) in aqueous solution, and an aqueous solution of trytamine (Trytamine) and D-tryptophan (D-Trp) with a molar concentration of 400 μM.
[0053] (3) Rolling circle amplification detection:
[0054] Prepare 100 μl of polymeriza...
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