Brassica napus promoter pbnunng0942890 and its application
A Brassica napus, promoter technology, applied in the field of plant genetic engineering and biology, can solve problems such as limited potential
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Embodiment 1
[0036] Example 1: Primer sequence design for rapeseed promoter pBnUnng0942890
[0037] According to the 1525bp intergenic sequence upstream of the rapeseed BnUnng0942890 gene obtained by sequencing the whole genome of rapeseed, a pair of primers were designed for PCR amplification, and the 5'upstream promoter sequence of rapeseed BnUnng0942890 was amplified. 3' and pBnUnng0942890-R: 5'-GGACTGACCACCCGGGGATCCcttccttaactttctacacata-3'. In the primer pBnUnng0942890-F, the sequence GAGATCTA CAGCGCT is the upstream sequence of the fusion site of the vector DX2181G, and the sequence AAGCTT is the restriction site of Hind III; in the primer pBnUnng0942890-R, the sequence GGACTGACCACCCGG is the downstream sequence of the fusion site of the vector DX2181G, the sequence GGATCC is the restriction site of BamH I.
Embodiment 2
[0038] Example 2: Preparation of Rapeseed Promoter pBnUnng0942890
[0039] The rapeseed used in the present invention is Brassica napus L. Darmor, and the rapeseed is sown in the field and managed in the field normally. Genomic DNA of rapeseed leaves was extracted by CTAB method, and polymerase chain reaction PCR (Polymerase chain reaction) was carried out using the extracted whole genome DNA of rapeseed as a template. PCR system: 2×Mix buffer 25 μL, pBnUnng0942890-F: 1 μL, pBnUnng0942890-R: 1 μL, DNA 1 μL, ddH 2 O 22 μL. The PCR program was: 94°C for 5 min; 35 cycles of 94°C for 30 s, 56°C for 30 s, and 72°C for 1 min; 72°C for 10 min; 4°C∞. The PCR product size is 1525bp (see figure 1 ), identified by 1.0% agarose gel electrophoresis, purified and recovered, and tested for concentration according to the instructions of the kit.
[0040] The DX2181G vector plasmid was completely digested by Hind III and BamH I, and recovered by 1% agarose gel electrophoresis. The recover...
Embodiment 3
[0041] Example 3: Sequence Analysis and Function Prediction of Rapeseed Promoter pBnUnng0942890
[0042] The pBnUnng0942890 sequence obtained by cloning and sequencing was used in the PlantCARE (Lescot M, Déhais P, Thijs G, et al. PlantCARE, a database of plantcis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences [J]. Nucleic acids research, 2002, 30 (1): 325-327. http: / / bioinformatics.psb.ugent.be / webtools / plantcare / html / ) online predictive analysis of functional components. The results show that, as shown in Table 1 and figure 2 As shown, pBnUnng0942890 contains the core elements TATAbox and CAAT box necessary for eukaryotic promoters. Further analysis of the promoter sequence found that, in addition to the necessary core elements, there are a variety of promoter functional elements in the pBnUnng0942890 sequence: G-Box: cis-acting regulatory element involved in light responsiveness light signal regulation cis-acting element; GT1...
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