CRISPR/RfxCas13d anti-plant RNA virus vector and construction method and application of CRISPR/RfxCas13d anti-plant RNA virus vector
A technology of RNA virus and construction method, which is applied in the fields of botanical equipment and methods, biochemical equipment and methods, applications, etc., to achieve the effects of precise targeting, efficient cutting of RNA, and wide recognition
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Embodiment 1
[0027] Example 1 Construction of CRISPR / RfxCas13d anti-plant RNA virus vector
[0028] The technical route for constructing the carrier is as follows:
[0029] 1. Construction of pCambia1300-RfxCas13d recombinant plasmid
[0030] A 3003bp RfxCas13d gene fragment was artificially synthesized and cloned into pUC57, named pUC57:RfxCas13d (Sangon Bioengineering (Shanghai) Co., Ltd.). Plasmids pUC57: RfxCas13d and pCambia1300-spCas9 (purchased from Hangzhou Baige Biotechnology Co., Ltd.) were double digested with BamHI and NcoI, and the 3003bp RfxCas13d gene fragment and the pCambia1300 vector backbone of about 10kb were recovered respectively. T4 DNA ligase (Thermo Cat #EL0011) connected the 3003bp RfxCas13d fragment to the pCambia1300 vector backbone, and the plasmid was named pCambia-RfxCas13d. Store the plasmid after sequencing, and store the Agrobacterium after successful verification.
[0031] Such as figure 1 Shown, the composition of plasmid pCambia1300-RfxCas13d is as ...
Embodiment 2
[0037] Example 2: The use of pCambia1300-RfxCas13d-crGFP can inhibit the infection of TuMV-GFP
[0038] 1. Agrobacterium plant infection and inoculation
[0039] (1) Activate Agrobacterium, inoculate the Agrobacterium liquid containing pCambia1300-RfxCas13d (Cas13d for short), pCambia1300-RfxCas13d-crGFP (Cas13d-crGFP for short), and TuMV-GFP plasmid to OD 600 At about 1.5, centrifuge at 4,000rpm for 12min to collect the bacteria, resuspend the bacteria in a double distilled water solution (infiltration buffer) containing a final concentration of 10mM magnesium chloride, 10mM MES (pH5.6) and 100mM acetosyringone, and adjust the bacteria solution concentration to make it OD 600 It is about 1.0 and placed at room temperature for 3 hours. Infectious clones of Cas13d-crGFP and TuMV-GFP Agrobacterium were injected simultaneously, or invasive clones of Cas13d-crGFP and TuMV-GFP Agrobacterium ( image 3 is the vector diagram of TuMV-GFP), the concentration of bacterial solution sh...
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