Buffer solution composition and application thereof
A buffer and composition technology, applied in the field of buffer composition and nucleic acid library construction, can solve the problems of restricting the construction of high-throughput workflow, the limited height of the ligation reaction platform, and the inability to advance the ligation time. The amount of enzyme used in the system, the inhibition effect is small, and the effect of improving efficiency and stability
- Summary
- Abstract
- Description
- Claims
- Application Information
AI Technical Summary
Problems solved by technology
Method used
Image
Examples
Embodiment 1
[0058]In this embodiment, the connection buffer system of the embodiment of the present invention is adopted, and the formula is: 45mM Tris buffer, 3mM divalent cation, 50mM monovalent cation, 5mM dithiothreitol (DTT), 10% PEG4000-8000 and 1.5mM ATP, the pH value is 8, and the influence of the change of reaction conditions on the yield of the library construction results is studied, and the results are as follows:
[0059] Table 5 Connection efficiency statistics at different connection times
[0060]
[0061] As shown in Table 5, the connection efficiency of the connection system of the embodiment of the present invention reaches 77.29% when connected overnight at 6 degrees Celsius, reaching a plateau. When the fixed connection time is ten minutes, the preferred connection temperature is 20 degrees Celsius. And the buffer system shows that the connection efficiency increases with time. The connection reaction temperature is 16-37 degrees Celsius, preferably 16 degrees Ce...
Embodiment 2
[0063] In this example, the buffer combination (universal buffer and ligation buffer) of the embodiment of the present invention, and the commercially available blue universal buffer and quick new ligation buffer are used as universal buffers to construct a DNA library
[0064] Connection efficiency statistics under different systems
[0065]
[0066]
[0067] Among them, the Blue buffer and quick new buffer are provided by Anolun Biological Company.
[0068] Among them, the formula of universal buffer is 10mM Tris-HCl buffer, 10mM MgCl 2 , 50mM KCl, 50mMNaCl, 1% Triton-x-100 and 1mM DTT; the formulation of the ligation buffer is 33-66mM Tris-acetate buffer, 6mMMg 2+ , 5mM dithiothreitol (DTT), 8% PEG6000 and 1mM ATP, the pH value is 8.
[0069] As shown in the table above, when the ligation reaction is carried out for 10 minutes, the ligation efficiency is twice that of the 0.5×blue+1×rapidligation buffer system. When the ligation reaction is carried out overnight at...
Embodiment 3
[0071] The buffer solution of the embodiment of the present invention in Example 2 was used in the link of NGS sequencing library construction for tumor drugs, and real ctDNA samples were used to compare the buffer solution of the embodiment of the present invention with the KAPA hyper reagent.
[0072] The buffer solution of Example 2 of the present invention and KAPA hyper reagent were used to construct libraries for two groups of ctDNA samples according to the aforementioned method for library construction. Each group started with 10 ng of samples and had 8 PCR cycles. The 6-component library using the buffer of Example 2 of the present invention has a high concentration. The buffer solution in Example 2 showed a higher library yield than the KAPA hyper reagent, indicating that the buffer solution in Example 2 increased the fragment conversion rate while reducing the reaction time, which was beneficial to the detection of low-frequency mutations in ctDNA samples.
[0073] T...
PUM

Abstract
Description
Claims
Application Information

- R&D
- Intellectual Property
- Life Sciences
- Materials
- Tech Scout
- Unparalleled Data Quality
- Higher Quality Content
- 60% Fewer Hallucinations
Browse by: Latest US Patents, China's latest patents, Technical Efficacy Thesaurus, Application Domain, Technology Topic, Popular Technical Reports.
© 2025 PatSnap. All rights reserved.Legal|Privacy policy|Modern Slavery Act Transparency Statement|Sitemap|About US| Contact US: help@patsnap.com