Looking for breakthrough ideas for innovation challenges? Try Patsnap Eureka!

Method for producing, in yeast, a hydroxylated triple helical protein, and yeast host cells useful in said method

a technology of which is applied in the field of producing, in yeast, a hydroxylated triple helical protein and yeast host cells useful in said method, can solve the problems of many episomal type vectors suffering stability problems, their use risks serious immunogenicity problems, and the transmission of infective diseases and spongiform encephalopathies

Inactive Publication Date: 2008-06-12
COMMONWEALTH SCI & IND RES ORG
View PDF7 Cites 7 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Benefits of technology

[0044]The method according to the invention requires that the first and second nucleotide sequences encoding the P4H α and β subunits and the third nucleotide sequence (i.e. the “product-encoding nucleotide sequence”) be introduced to a suitable yeast host cell in a manner such that they are borne on one or more DNA molecules that are replicated, stably retained and segregated by the yeast host cell during culturing. In this way, all daughter cells will include the first, second and product-encoding nucleotide sequences and thus stable and efficient expression of a hydroxylated triple helical protein product can be ensured throughout the culturing step and without the use of continuous selection pressure.
[0052]Alternatively, the portion of the product-encoding nucleotide sequence(s) encoding the repeat unit of domain Z may be generated using DNA ligase to join non-palindromic nucleotide sequences, which may be produced by PCR techniques or chemical DNA synthesis, end to end in such a manner as to maintain the open reading frame of the product-encoding nucleotide sequence and which ensures that every third amino acid of the encoded Z domain is Gly. The use of complimentary, but non-palindromic, overhanging sequences at the ends of the designed non-palindromic nucleotide sequences ensures that they are joined in a consistent head to tail orientation. Further, the strategy allows the ready linking of nucleotide sequences encoding other polypeptide or peptide domains (e.g. the abovementioned A, B, C and / or D), by utilising terminal non-palindromic overhang sequences which result in the generation of a restriction enzyme site. This restriction enzyme site can then be used for the additional cloning of nucleotide sequences encoding the other polypeptide or peptide domains.
[0055]The product-encoding nucleotide sequence(s) also comprise a nucleotide sequence preferably selected to match the codon use preferences of the selected yeast expression host, and is also constructed so as to minimise the potential for GGG to CCC interactions that may destabilize the structure.
[0067]The method of the present invention enables the production of triple helical protein products with two or more repeat units, which allows control of biological function and permits the possibility of enhancing the efficacy of selected domains by, for example, increasing binding sites and avidity for interacting agents and by activation through receptor clustering.

Problems solved by technology

While such animal-sourced collagens have been successful, there is some concern that their use risks serious immunogenicity problems and transmission of infective diseases and spongiform encephalopathies (e.g. bovine spongiform encephalopathy (BSE)).
Indeed, even under continuous selection pressure, many episomal type vectors suffer stability problems if they are large or are present at relatively low copy number.

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Method for producing, in yeast, a hydroxylated triple helical protein, and yeast host cells useful in said method
  • Method for producing, in yeast, a hydroxylated triple helical protein, and yeast host cells useful in said method
  • Method for producing, in yeast, a hydroxylated triple helical protein, and yeast host cells useful in said method

Examples

Experimental program
Comparison scheme
Effect test

example 1

Construction of a Yeast Vector for Co-Ordinated Co-Expression of the a and β Subunits of Prolyl-4-Hydroxylase

Production of Yeast Expression Vector:

[0078]pYEUra3 (Clontech) contains the bidirectional promoter for GAL 1-10 expression. Induction by galactose in the absence of glucose results in high level expression from pGAL1 of any protein encoded by DNA sequences inserted in the correct orientation in the MCS (multiple cloning site) [either XhoI, SalI, XbaI or BamHI sites] provided there is an initiating ATG start codon. For pGAL10, expression induced by galactose occurs if the DNA sequences to be expressed are inserted in frame with the ATG codon of GAL 10 when said DNA sequences to be expressed is inserted in the EcoRI site.

[0079]In order to utilise the EcoRI site for cloning, without the necessity that the insert be in frame with the ATG of GAL10 for expression, it was necessary to modify pYEUra3 to remove the GAL10 initiation codon. This was done as follows. A PCR fragment was g...

example 2

Co-ordinated Co-Expression of a Collagen Segment and Prolyl-4-Hydroxylase (α and β Subunit) and Synthesis of Hydroxylated Collagen TYPE III in Yeast

[0083]A 1.6 kbp recombinant collagen fragment was generated by PCR using primers 1989 [Forward primer 5′-gct.agc.aag.ctt GGA.GCT.CCA. GGC.CCA.CTT.GGG.ATT.GCT.GGG-3′ (SEQ ID NO: 15)] and 1903 [Reverse primer 5′-tcg.cga.tct.aga.TTA.TAA.AAA.GCA.AAC.AGG.GCC.AAC.GTC.CAC. ACC-3′ (SEQ ID NO:16)] homologous to a region of the collagen type III alpha 1 chain (COL3A1). The template for isolation of the fragment of type III collagen alpha 1 chain was prepared from Wizard purified DNA obtained from a cDNA library [HL1123n Lambda Max 1 Clontech Lot#1245, Human Kidney cDNA 5′-Stretch Library].

[0084]The actual size of the isolated 1.6 kbp fragment is 1635 bp, comprising 1611 bp of COL3A1 DNA flanked either side by 12 bp derived from the primers. The 1611 bp of COL3A1 DNA corresponds to nucleotides #2713-4826 (i.e. codon #905-1442) of the full-length co...

example 3

Use of Yeast Artificial Chromosomes [YACs] for Co-Ordinated expression of the α and β Subunits of Prolyl-4-Hydroxylase [P4H]

[0101]pYAC5 [11454 bp] (Kuhn and Ludwig, 1994) was digested with BamHI to liberate the HIS3 gene [1210 bp] from between the 2 telomere ends and with SalI-NruI to produce two fragments [left arm: fragment 1, 5448 bp & right arm: fragment2, 4238 bp] which were gel purified. Fragment 1 was BamHI-telomere end-E. coli ori-β-lactamase gene [ampicillin-resistance]-TRP1-ARS1-CEN4-tRNAsup-o-SalI. Fragment 2 was BamHI-telomere end-URA3-NruI.

[0102]pYEUra3.2.12β#39α#5 was digested with SalI-EcoRV to produce a P4H expression cassette fragment of the form SalI-XbaI-BamHI-α-ATG-BamHI-pGAL1-10-EcoRI-ATG-β-EcoRI-SmaI-EcoRV [4864 bp] which was gel purified. The expression cassette fragment encoding the cc and 13 subunits of P4H under the control of a galactose inducible bidirectional promoter was ligated with fragments 1 and 2 of the BamHI-SalI-NruI digested pYAC5 and the ligati...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

PropertyMeasurementUnit
Lengthaaaaaaaaaa
Login to View More

Abstract

The invention relates to a method for producing hydroxylated triple helical proteins in yeast host cells by introducing to a suitable yeast host cell, DNA sequences encoding the triple helical protein as well as prolyl 4-hydroxylase (PH4), in a manner wherein the introduced DNA sequences are replicated, stably retained and segregated by the yeast host cells.

Description

[0001]This is a Continuation of application Ser. No. 10 / 023,831, filed Dec. 21, 2001; which is a Continuation-in-part Application of application Ser. No. 09 / 297,269, filed Apr. 28, 1999 (now U.S. Pat. No. 6,451,557); which in turn is a National stage filing under 35U.S.C. § 371 of PCT / AU97 / 00721, filed Oct. 29, 1997; the entire disclosure of each of which is incorporated herein by reference.FIELD OF THE INVENTION[0002]This invention relates to the production of hydroxylated triple helical proteins such as natural and synthetic collagens, natural and synthetic collagen fragments, and natural and synthetic collagen-like proteins, by recombinant DNA technology. In particular, the invention relates to a method for producing hydroxylated triple helical proteins in yeast host cells by introducing to a suitable yeast host cell, DNA sequences encoding the triple helical protein as well as prolyl 4-hydroxylase (P4H), in a manner wherein the introduced DNA sequences are replicated, stably ret...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
IPC IPC(8): A61K38/00C12P21/04C12N5/06C07K16/00C12N15/09A61K38/17A61K48/00C07K14/78C12N1/19C12N9/02C12N15/12C12P21/02C12R1/84
CPCA61K38/00C12P21/02C12N9/0071C07K14/78
Inventor VAUGHAN, PAUL RICHARDGALANIS, MARIARAMSHAW, JOHN ALAN MAURICEWERKMEISTER, JEROME ANTHONY
Owner COMMONWEALTH SCI & IND RES ORG
Who we serve
  • R&D Engineer
  • R&D Manager
  • IP Professional
Why Patsnap Eureka
  • Industry Leading Data Capabilities
  • Powerful AI technology
  • Patent DNA Extraction
Social media
Patsnap Eureka Blog
Learn More
PatSnap group products