Hemicellulase, and coding gene and application thereof
A technology of hemicellulase and coding gene, applied in the field of hemicellulase and its coding gene and application, can solve the problems of increasing workload, not paying for the loss, and not cracking the fruit, so as to reduce the cracking rate and ensure high The effect of output and application prospect is broad
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Embodiment 1
[0040] The cloning of embodiment 1 cellulase MAN7 gene:
[0041] The obtaining of the full-length DNA sequence of the gene of Arabidopsis hemicellulase comprises the following steps:
[0042] 1. Search in the TAIR database (http: / / www.arabidopsis.org) with cellulase (cellulase) as a keyword, and perform Blast comparison on the cDNA sequences of the searched genes in the TAIR database respectively, and take the comparison All the genes whose E-Value is less than 0.01 in the results are regarded as candidate genes (39 in total).
[0043] 2. The obtained candidate genes were searched in the gene expression microarray (microarray expression) database in the TAIR database, and the genes expressed in the carpel at the 15th stage of floral development were retained, and the rest were eliminated (the remaining 22 genes).
[0044] 3. Enter the remaining candidate genes into the ATTED-II database (http: / / atted.jp) to query related co-expressed genes. Search for transcription factors r...
Embodiment 2
[0062] Example 2: Changes in the expression of hemicellulase MAN7 in pod development
[0063] When the wild-type Arabidopsis material (Col-0) bloomed, mark the flower stalk with ropes of different colors, record the corresponding flowering time, and then according to the number of days after flowering (6D, 8D, 10D, 12D) and The color change of pods (18A: semi-yellow pods; 18B: full-yellow pods) was collected, and the obtained materials were used as samples by QIAGEN Co., Ltd. The plant Mini Kit extracts RNA, reverse transcribes it into cDNA, and makes three sets of samples in parallel. Then use quantitative PCR to detect the expression levels of the MAN7 gene in pods at different developmental stages, and the quantitative primers used are as follows:
[0064] MAN7 quantitative PCR upstream primer: 5'-ATCGCCAATAACCGCATTCC-3';
[0065] MAN7 quantitative PCR downstream primer: 5'-GGGATTGCTCGCTTGAGTCT-3';
[0066] Internal reference actin8 upstream primer: 5'-TAAGGTCGTGGCACCAC...
Embodiment 3
[0074] Example 3: Screening of Hemicellulase MAN7 Mutants
[0075] The Arabidopsis MAN7 inactivation homozygous mutant was screened by the following method: the seeds of two different T-DNA insertion mutant lines at the MAN7 (AT5G66460) site were obtained from ABRC (Arabidopsis Biological Resource Center) (seed number: GABI_747H02 and SAIL_424_H03) (Alonso J.M., Stepanova A.N., Leisse T.J., Kim C.J., Chen H., Shinn P., Stevenson D.K., Zimmerman J., Barajas P., Cheuk R., et al. 2003. Genome-wide insertional mutagenesis of Arabidopsis thaliana.Science301:653-657.), and design the required primers according to the information provided by the website, the primer sequences are as follows:
[0076] Man7-1 identifies the upstream primer: 5'-CACTTATTGCGCCTATGCTTC-3';
[0077] Man7-1 identifies the downstream primer: 5'-GTAGGAGCCAGGGGAATACTG-3';
[0078] Man7-3 identifies the upstream primer: 5'-GAAATGGCTGCTCATGTGAAATCA-3';
[0079] Man7-3 identifies the downstream primer: 5'-CTCTTC...
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