A method and kit for detecting genetic information of genes related to folic acid metabolism
A technology of folic acid metabolism and genotyping, which is applied in biochemical equipment and methods, microbial measurement/inspection, DNA/RNA fragments, etc. It can solve problems such as inability to judge cutting, interference result judgment, and inability to correctly type, etc., to reduce The effect of detection cost, low detection cost and accuracy guarantee
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Embodiment 1
[0081] This example aims to use the same enzyme, namely HinfI, to identify two polymorphic sites of the MTHFR gene in the same system, that is, the rs1801133 site [for related sequence data, see figure 1 ], rs1801131 locus [for related sequence data, see figure 2 】. The rs1801133 site of the MTHFR gene in the GenBankdbSNP database and its related sequences are shown in SEQ ID NO: 23, Y is the base of the polymorphic site, Y=C or T, wherein C is the wild-type allele, T is the mutant type, etc. alleles, see https: / / www.ncbi.nlm.nih.gov / projects / SNP / snp_ref.cgi? rs=1801133. MTHFR gene rs1801131 site and related sequences such as SEQ ID NO: 24, M is the base of the polymorphic site, M=A or C, A is the wild-type allele, C is the mutant allele, see https: / / www.ncbi.nlm.nih.gov / projects / SNP / snp_ref.cgi? rs=1801131.
[0082] Using oral epithelial cells as a template, in the same system, two pairs of primers (outer primers F1, R1, targeting rs1801133 locus) and (outer primers F3...
Embodiment 2
[0114] The purpose of this embodiment is to establish a method for identifying the rs1801394 site of the MTRR gene using HinfI (for related sequence data, see image 3 ) method, the PCR product used for enzyme cleavage typing must not only have polymorphic site recognition sequences, but also have enzyme cleavage internal control sequences (introduced by creating enzyme cleavage site PCR). The rs1801394 site of the MTRR gene in the GenBank dbSNP database and its related sequences such as SEQ ID NO: 25, R is the base of the polymorphic site, M=A or G, where A is the wild-type allele, and G is the mutant allele Gene, see https: / / www.ncbi.nlm.nih.gov / projects / SNP / snp_ref.cgi? rs=1801394.
[0115] Oral epithelial cells were used as templates, and the outer primers F5 (SEQ ID NO: 9) and R5 (SEQ ID NO: 10) were used in the same system to perform the first round of PCR, and then the PCR products of the first round were used as templates in the same system. In the second round of PC...
Embodiment 3
[0137] In this example, on the basis of Example 1 and Example 2, a HinfI can be used to simultaneously identify three sites of MTHFR gene rs1801133 site [C677T], rs1801131 site [A1298C] and MTRR gene rs1801394 site [A66G] In the method, the PCR product of each site must not only have the polymorphic site recognition sequence, but also have the enzyme digestion internal control sequence. It uses oral epithelial cells as a template, and uses 3 pairs of outer primers (F1, R1, targeting rs1801133) + (F3, R3, targeting rs1801131) + (F5, R5, targeting rs1801394) in the same system. In the first round of PCR, use the first round of PCR products as templates, and use the inner primers (F2, R2, for the rs1801133 site) + (F4, R4, for the rs1801131 site) + (F6, R6, for the rs1801131 site) in the same system. rs1801394 site) for the second round of PCR, the second round of PCR products were digested with HinfI, and the genotype was determined after electrophoresis of the digested products...
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