Application of Ae.tauschii ssp.strangulata Yr4DS gene to stripe rust resistant breeding of wheat plants

A stripe rust and gene technology, applied in the field of molecular genetics, can solve the problems of limiting the effective utilization of stripe rust resistance genes and the limited number of stripe rust resistance genes.

Active Publication Date: 2019-02-12
泉脉农业科技有限公司
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  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0004] The use of disease resistance genes is an important means of controlling stripe rust. Hundreds of stripe rust resistance genes have been mapped in the genomes of wheat and its close relatives worldwide. However, due to factors such as the large and complex wheat genome, the resistance Very limited number of stripe rust genes
So far, only five genes Yr5, Yr7, Yr15, Yr18 and Yr36 have been cloned (Fu et al. .Nature Plants4:662-668; Klymiuk et al.2018.Nature Communications 9:3735), greatly limiting the effective use of stripe rust resistance genes in wheat and other crop breeding

Method used

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  • Application of Ae.tauschii ssp.strangulata Yr4DS gene to stripe rust resistant breeding of wheat plants
  • Application of Ae.tauschii ssp.strangulata Yr4DS gene to stripe rust resistant breeding of wheat plants
  • Application of Ae.tauschii ssp.strangulata Yr4DS gene to stripe rust resistant breeding of wheat plants

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Embodiment 1

[0090] Example 1: Using transcriptomics to identify genes specifically expressed in stripe rust-resistant parents and disease-resistant BSA pools

[0091] The present invention utilizes RNA sequencing (RNA-seq) and group segregation analysis (Bulked Segregant Analysis, BSA), has compared the segregation group F 6 Leaf transcriptomes of stripe rust-resistant BSA pools and stripe rust-susceptible BSA pools at adult plant stage. RNA sequencing uses high-throughput sequencing technology to directly measure cDNA molecules in samples. The present invention compares stripe rust-resistant A. tachyphyllum PI511383, stripe rust-susceptible A. tachyplasia PI486274 and F from both sources by RNA sequencing. 6 Transcriptomes of adult-stage leaves of the BSA-resistant pool (Rpool) consisting of 12 stripe rust-resistant lines and the BSA-susceptible pool (Spool) consisting of 11 stripe rust-susceptible lines in the generation homozygous lines. A biological replicate was determined for diff...

Embodiment 2

[0093] Embodiment 2: Verification of the full-length cDNA of the Yr4DS gene of Goatwort rough

[0094] In order to verify the full-length (full-length) cDNA of the Yr4DS gene, the total RNA of the leaves of Goat grass PI511383 inoculated with stripe rust 10 days was extracted using TRIzol reagent, and then the RevertAid Frist Strand cDNASynthesis kit (Thermo Scientific, Waltham, MA, USA) prepared the cDNA template. The 5' and 3' ends of the full-length cDNA of the Yr4DS gene (SEQ ID NO.1 and 3) were isolated using rapid amplification of cDNA ends (RACE), using the SMARTer RACE cDNA Amplification kit (ClontechLaboratories, Mountain View, CA, USA), the operation method refers to the kit instructions. The nested primers of 5' end RACE PCR are Yr4DS-RP10 and Yr4DS-RP11, wherein Yr4DS-RP11 is the nested primer of Yr4DS-RP10. There are two 3' ends of this gene, the nested primers of the first 3' end RACE PCR are Yr4DS-FP10 and Yr4DS-FP11, wherein Yr4DS-FP11 is the nested primer of...

Embodiment 3

[0095] Example 3: Construction and screening of 'PI 511383' genomic Fosmid library

[0096]To facilitate the cloning of genomic DNA, the PI511383 genomic DNA Fosmid library was created, and the construction method was referred to published literature (Jetty.2005.TheorAppl Genet111:1596-1607). First, high-molecular weight genomic DNA (high-molecular weight, HMW) was extracted from PI511383 leaves, and the high-molecular weight genomic DNA was randomly "cut" into fragments of different sizes by repeated freezing and thawing (liquid nitrogen / 45°C, 20-30 times); Use 1% agarose gel and pulsed-field gel electrophoresis (pulsed-field gel electrophoresis, PFGE) free DNA fragment products to purify DNA fragments between 36-60kb; use end repair enzymes to fill in DNA fragments, repeat pulsed electrophoresis and fragments In the purification step, the DNA fragments obtained after two purifications were cloned into the Fosmid vector pCC1FOS; after packaging the phage extracts, the host ba...

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Abstract

The invention discloses application of an Ae.tauschii ssp.strangulata Yr4DS gene to stripe rust resistant breeding of wheat plants. A novel wheat stripe rust resistant gene Yr4DS is cloned from Ae.tauschii ssp.strangulata for the first time, and the sequence of the gene is shown as SEQ ID NO.1, SEQ ID NO.3, SEQ ID NO.5, SEQ ID NO.7, SEQ ID NO.9 or SEQ ID NO.10. The gene can effectively regulate and control the stripe rust resistance of wheat, and enriches the gene resources of wheat stripe rust resistance. The expression of the Yr4DS is found to be capable of providing a high-level stripe rustresisting function, indicating that the man-made manipulation of the Yr4DS gene can endow wheat and other wheat plants with resistance to stripe rust. By means of Yr4DS gene-based molecular mark assistant breeding, genetic transformation and gene editing, the resistance level of wheat and other wheat plants to stripe rust can be improved, and intermediate materials and production varieties capable of resisting stripe rust can be cultured and created.

Description

technical field [0001] The invention relates to the technical field of molecular genetics, in particular to a goat grass Yr4DS gene and its application in breeding of wheat plants against stripe rust. Background technique [0002] Wheat Stripe Rust (or Yellow Rust) is a fungal disease caused by Puccinia striiformis f.sp.tritici. (Pst), which endangers wheat production worldwide. Wheat stripe rust can usually cause 0.5%-5% yield loss, and when it occurs seriously, it can cause 5%-25% yield loss, or even extinction (Chen.2005.Canadian Journal of Plant Pathology 27:314-337). China is an area where wheat stripe rust commonly occurs in the world. There have been 4 wheat stripe rust pandemics (1950, 1964, 1990 and 2002), each of which resulted in a yield loss of hundreds of millions of kilograms, and the total wheat yield loss was about 1.2 billion kilograms, of which the output loss in 1950 was about 41.4% of the total national wheat output (Chen Wanquan et al., 2013. Chinese Ag...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N15/29C07K14/415C12N15/82A01H5/00A01H6/46C12Q1/6895C12N15/11
CPCC12N15/8218C12N15/8282C12Q1/6895C07K14/415C12Q2600/13A01H5/10A01H6/4678A01H1/1255Y02A40/146
Inventor 付道林张朝中刘登才黄林吴佳洁张会飞倪飞张连全高阁
Owner 泉脉农业科技有限公司
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