Application of Ae.tauschii ssp.strangulata Yr4DS gene to stripe rust resistant breeding of wheat plants
A stripe rust and gene technology, applied in the field of molecular genetics, can solve the problems of limiting the effective utilization of stripe rust resistance genes and the limited number of stripe rust resistance genes.
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Embodiment 1
[0090] Example 1: Using transcriptomics to identify genes specifically expressed in stripe rust-resistant parents and disease-resistant BSA pools
[0091] The present invention utilizes RNA sequencing (RNA-seq) and group segregation analysis (Bulked Segregant Analysis, BSA), has compared the segregation group F 6 Leaf transcriptomes of stripe rust-resistant BSA pools and stripe rust-susceptible BSA pools at adult plant stage. RNA sequencing uses high-throughput sequencing technology to directly measure cDNA molecules in samples. The present invention compares stripe rust-resistant A. tachyphyllum PI511383, stripe rust-susceptible A. tachyplasia PI486274 and F from both sources by RNA sequencing. 6 Transcriptomes of adult-stage leaves of the BSA-resistant pool (Rpool) consisting of 12 stripe rust-resistant lines and the BSA-susceptible pool (Spool) consisting of 11 stripe rust-susceptible lines in the generation homozygous lines. A biological replicate was determined for diff...
Embodiment 2
[0093] Embodiment 2: Verification of the full-length cDNA of the Yr4DS gene of Goatwort rough
[0094] In order to verify the full-length (full-length) cDNA of the Yr4DS gene, the total RNA of the leaves of Goat grass PI511383 inoculated with stripe rust 10 days was extracted using TRIzol reagent, and then the RevertAid Frist Strand cDNASynthesis kit (Thermo Scientific, Waltham, MA, USA) prepared the cDNA template. The 5' and 3' ends of the full-length cDNA of the Yr4DS gene (SEQ ID NO.1 and 3) were isolated using rapid amplification of cDNA ends (RACE), using the SMARTer RACE cDNA Amplification kit (ClontechLaboratories, Mountain View, CA, USA), the operation method refers to the kit instructions. The nested primers of 5' end RACE PCR are Yr4DS-RP10 and Yr4DS-RP11, wherein Yr4DS-RP11 is the nested primer of Yr4DS-RP10. There are two 3' ends of this gene, the nested primers of the first 3' end RACE PCR are Yr4DS-FP10 and Yr4DS-FP11, wherein Yr4DS-FP11 is the nested primer of...
Embodiment 3
[0095] Example 3: Construction and screening of 'PI 511383' genomic Fosmid library
[0096]To facilitate the cloning of genomic DNA, the PI511383 genomic DNA Fosmid library was created, and the construction method was referred to published literature (Jetty.2005.TheorAppl Genet111:1596-1607). First, high-molecular weight genomic DNA (high-molecular weight, HMW) was extracted from PI511383 leaves, and the high-molecular weight genomic DNA was randomly "cut" into fragments of different sizes by repeated freezing and thawing (liquid nitrogen / 45°C, 20-30 times); Use 1% agarose gel and pulsed-field gel electrophoresis (pulsed-field gel electrophoresis, PFGE) free DNA fragment products to purify DNA fragments between 36-60kb; use end repair enzymes to fill in DNA fragments, repeat pulsed electrophoresis and fragments In the purification step, the DNA fragments obtained after two purifications were cloned into the Fosmid vector pCC1FOS; after packaging the phage extracts, the host ba...
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