Universal-type CAR-T cell based on base editing and preparation method and application thereof
A general-purpose, cell-based technology, applied in the field of preparation of general-purpose CAR-T cells, can solve problems such as complex preparation process, off-target effects, and immune system damage, and achieve simplified preparation procedures, improved transfection efficiency, and simple preparation process Effect
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Embodiment 1
[0056] Example 1 Construction of recombinant expression vectors.
[0057] The single base editing system used in the present invention is BE-Plus: a stop codon is introduced through CT mutation to achieve gene knockout. BE-Plus two-plasmid system (scFv-APOBEC-UGI, GCN4-D10A), 10 GCN4s are connected to the N-terminal of D10A, and one scFv is connected to the N-terminal of APOBEC. In this way, GCN4-D10A can recruit 10 scFv-APOBECs, increasing the probability of mutation. The work window is expanded from 4-8 to 4-16, making the efficiency higher.
[0058] Use SV201-pGL3-U6-gRNA-Puromycin mut Bsa1 ACCG in the present invention (see figure 1 ) as a backbone carrier, linearized by restriction endonuclease Bsa1 (NEB), and ligated with artificially synthesized sgRNA under the action of T4 ligase to form a recombinant vector.
[0059] Synthesis of TRAC-sgRNA and B2M-sgRNA: Select sgRNA as reverse sgRNA (CCA is the target codon, GGG is the PAM sequence). TRAC-sgRNA synthesized unidi...
Embodiment 2
[0060] Example 2 sgRNA functional verification.
[0061] 1) Cell culture and transfection.
[0062]A. Use the electroporation kit to transfect HEK293T cells to verify the targeting efficiency of sgRNA. 2 µg pST1374-scFv-APOBEC-UGI-GB1 (see figure 2 ), 2.0 µg of pST1374-N-NLS-GCN4-D10A (see image 3 ), 2µgpGL3-U6-TRAC sgRNA BE plasmid was mixed with the electroporation solution, and the cells were co-transfected. After 6-8 hours, the medium was changed, and Blasticidin (invitrigen, ant-bl-1) and Puromycin (invitrigen, ant-pr-1) and Puromycin (invitrigen, ant-pr- 1) Drug screening, collect cells after 48 hours.
[0063] B. Use the electroporation kit to transfect HEK293T cells to verify the targeting efficiency of sgRNA, add 2 µg pST1374-scFv-APOBEC-UGI-GB1 (see figure 2 ), 2.0 µg of pST1374-N-NLS-GCN4-D10A (see image 3 ), 2µgpGL3-U6-B2M sgRNA BE plasmid was mixed with the electroporation solution, and the cells were co-transfected. After 6-8 hours, the medium was changed...
Embodiment 3
[0067] Example 3 Preparation of PBMC cells and sorting of CD3 positive T cells.
[0068] 1) Use a blood collection bag to collect 80-100 mL of peripheral blood from healthy people (shake while collecting to fully mix the peripheral blood with the anticoagulant), and isolate PBMCs in a sterile cell preparation workshop. Transfer the peripheral blood to a 50ml centrifuge tube, centrifuge at 800g at room temperature for 15 minutes, absorb the upper layer of yellow autologous plasma into a new 50ml centrifuge tube, inactivate at 56°C for 30 minutes, and store it at -20°C for later use; add to the lower cell layer Equal volume of PBS, mix up and down;
[0069] 2) Draw 15ml of lymphocyte separation medium (Ficoll-Paque Plus, GE) at the bottom of a new 50ml centrifuge tube, and slowly add 30ml of diluted blood along the tube wall to the upper layer of the lymphocyte separation medium, put the centrifuge tube in a centrifuge, 450g, slowly Rise and descend slowly for 25 minutes, no br...
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