Buffer solution for nucleic acid amplification colorimetric reaction and application thereof
A colorimetric reaction and buffer technology, applied in the buffer field, can solve the problem of inconspicuous discoloration results, and achieve the effect of efficient visual detection
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Embodiment 1
[0058] Embodiment one, buffer solution and amino acid titration curve
[0059] Buffers are formulated from the following reagents:
[0060] Potassium chloride 50mM
[0062] Magnesium Sulfate Heptahydrate 2mM
[0063] Tween-20 0.1% (volume fraction)
[0064] Glycine 2mM.
[0065] To the buffer solution with an initial pH value of 9.74, 50 μL of 1M hydrochloric acid was added dropwise each time, the pH change of each buffer solution was observed, and a titration curve was drawn. from figure 1 It can be seen that in the range of pH 8.86-3.26, adding a small amount of acid can cause a drastic change in pH.
Embodiment 2
[0066] Embodiment two, the colorimetric detection of SEA reaction
[0067] The buffer solution of the present invention is combined with the SEA amplification technology to verify whether the colorimetric detection of the target by the SEA technology can be realized.
[0068] 1. Colorimetric reaction system:
[0069] Buffer: according to the buffer in Example 1 of the present invention (the pH value in the reaction system is 8.80);
[0070] dNTPs: (10mM): 0.8μL;
[0071] Primer P1 (sequence is 5'-GTCATTGGAAACTGGAAGACTG-3'(SEQ ID No.2)): 10 -6 m
[0072] Primer P2 (sequence is 5'-CCACTCTCCTCTTCTGCAC-3'(SEQ ID No.3)): 10 -6 m
[0073] Bst 2.0 Warm Start TM DNApolymerase (8U / μL): 0.1μL;
[0074] Neutral red dye: 100μM;
[0075] The positive control in the reaction system contained 1 μL of Listeria monocytogenes genomic DNA (5'-GTCATTGGAAACTGGAGACTGGAGTGCAGAAGAGGAGAGTGG-3' (SEQ ID No.1)) and RNA target, while water was used as the target nucleic acid (NTC) as a blank cont...
Embodiment 3
[0078] Embodiment three, the optimization of buffer solution pH
[0079] Due to the nature of the buffer, the trace amount of H generated during the amplification reaction + The pH of the reaction solution can be changed suddenly, thereby affecting the color change of the acid indicator. Therefore, the pH value of the initial reaction system has a great influence on the judgment of the results before and after the reaction. In order to obtain the best results, the buffer solution of the present invention is set to different initial pHs, respectively: 8.80, 8.60, 8.40, 8.20, 8.00. With dNTPs (0.8mM), primer P1 (SEQ ID No.2), P2 (SEQ ID No.3) (10 -6 M), Bst 2.0 WarmStart TM DNA polymerase (0.8U), neutral red dye (100μM) mixed to target Listeria monocytogenes genomic DNA and RNA. At the same time, water was used as the target nucleic acid (NTC) as a blank control. Finally, 10 μL of the reaction system was made up with water.
[0080] from image 3 It can be seen from the ...
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