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A method for detecting Salmonella typhimurium based on bca-rpa and CRISPR-cas12a system

A technology for Salmonella and Typhimurium, applied in the field of detection of Salmonella Typhimurium, can solve the problems of barcode DNA loss, complicated process, and reduced sensitivity, and achieve the effects of improving specificity, reducing pollution and improving sensitivity

Active Publication Date: 2022-07-19
NINGBO UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Therefore, many biological barcode detection methods have been developed for the rapid detection of biological and chemical contamination in food, and the detection limit of BCA is 1000 times lower than that of conventional ELISA kits
However, BCA usually requires complex steps to release barcoded DNA from the surface of AuNPs probes, which complicates the process and may result in the loss of barcoded DNA, thereby reducing the sensitivity.
At present, there are no relevant research reports on the method of visual detection of Salmonella typhimurium using biological barcode detection technology combined with recombinase polymerase amplification technology and CRISPR-Cas12a system at home and abroad

Method used

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  • A method for detecting Salmonella typhimurium based on bca-rpa and CRISPR-cas12a system
  • A method for detecting Salmonella typhimurium based on bca-rpa and CRISPR-cas12a system
  • A method for detecting Salmonella typhimurium based on bca-rpa and CRISPR-cas12a system

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specific Embodiment 1

[0034] A method for detecting Salmonella typhimurium based on BCA-RPA and CRISPR-Cas12a system, such as figure 1 shown, including the following steps:

[0035] (1) Synthesis of AuNPs probes

[0036] A. Put 100 mL of 1 mM HAuCl 4 After the aqueous solution was heated to boiling with magnetic stirring, 10 mL of 38.8 mM trisodium citrate aqueous solution was added, and the heating was stopped when the solution changed from light yellow to wine red, and the magnetic stirring was continued for 15 minutes to obtain AuNPs solution, which was stored at 4 °C in the dark for later use. ;

[0037] B. AuNPs solution with Na 2 CO 3 After the solution was adjusted to pH 7.4, 10 μL of 1 mg / mL anti-typhoid fever monoclonal antibody solution was added, and ligated DNA was added to a final concentration of 3 μM, and the reaction was carried out at -80 °C for 15 minutes, at 9000 rpm, 4 Centrifuge at ℃ for 15 minutes to remove the supernatant, disperse the pellet in 1 mL of 0.01 M phosphate...

specific Embodiment 2

[0047] In order to verify the value of the detection method of the specific embodiment of the present invention in practical application, a standard solution of Salmonella typhimurium was added in milk as an actual sample, and different concentrations of Salmonella typhimurium in the milk were detected, and the results were as follows: Figure 5 , 6 shown;

[0048] Depend on Figure 5 It can be seen that different concentrations (10 0 -10 6 CFU / mL) fluorescence intensity in the presence of Salmonella typhimurium, the result can be read by naked eyes, and can be used for the detection of Salmonella typhimurium in actual samples.

[0049] Depend on Image 6 It can be seen that the method of the present invention detects Salmonella typhimurium in milk, and the fluorescence intensity of different concentrations of Salmonella typhimurium is linearly related to the concentration of Salmonella typhimurium, the correlation coefficient R=0.990, and the linear relationship is good....

specific Embodiment 3

[0050] Figure 7 For a specific embodiment, a detection method is respectively paired with 10 5 CFU / mL Salmonella typhimurium, 10 5 CFU / mL E. coli, 10 5 CFU / mL Listeria monocytogenes, 3×10 5 CFU / mL Salmonella typhimurium: 3×10 5 CFU / mL E. coli: 3×10 5 CFU / mL Listeria monocytogenes = 1:1:1 fluorescence intensity value for detection; Figure 7It can be seen that when Salmonella typhimurium exists, the detected fluorescence intensity value is far greater than the fluorescence intensity value of interfering food-borne pathogens, indicating that the sensor has specific detection of Salmonella typhimurium.

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Abstract

The invention discloses a method for detecting Salmonella typhimurium based on BCA-RPA and CRISPR-Cas12a system, which is characterized by comprising the following steps: adding a nano-magnetic bead probe solution and an AuNPs probe solution to a test containing Salmonella typhimurium simultaneously In the solution, after shaking and reacting at room temperature for 45 minutes, magnetic separation and washing 3 times, and redissolving in enzyme-free water to obtain the MNB probe-bacteria-AuNPs probe sandwich structure, the MNB probe-bacteria-AuNPs probe The sandwich structure was subjected to RPA amplification reaction, and the reaction was carried out at 37 °C for 5 minutes. After the reaction, the fluorescence was observed under blue light for visual detection or quantitative detection with a microplate reader. The curve obtained according to the corresponding fluorescence intensity values ​​of Salmonella typhimurium at different concentrations , the concentration value of Salmonella typhimurium in the solution to be tested is obtained, and the advantages are simple and rapid, high sensitivity and visual detection.

Description

technical field [0001] The invention relates to a method for detecting Salmonella typhimurium, in particular to a method for detecting Salmonella typhimurium based on BCA-RPA and CRISPR-Cas12a systems. Background technique [0002] Salmonella typhimurium ( S. typhimurium ) is one of the main causes of food-borne diseases, which has caused a huge threat to human health. Eating food infected with Salmonella typhimurium can cause vomiting, diarrhea, and even death. About 80% of foodborne pathogenic disease outbreaks in China are caused by Salmonella typhimurium. Therefore, the establishment of a sensitive and rapid Salmonella typhimurium identification method is essential to effectively ensure the food safety of the food industry and individuals. [0003] There are various existing methods for detecting food-borne pathogens, such as: conventional culture method, enzyme-linked immunosorbent assay (ELISA), polymerase chain reaction (PCR) and so on. The conventional culture me...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/689C12Q1/6804C12Q1/6844C12Q1/10C12R1/42
CPCC12Q1/689C12Q1/6804C12Q1/6844C12Q2563/185C12Q2563/131C12Q2563/143C12Q2563/155C12Q2521/507C12Q2521/327C12Q2525/161C12Q2563/107
Inventor 乔朝晖蔡琪琦孙梦妮马娜张进杰杨文鸽
Owner NINGBO UNIV