Various important aquagenic zoonoses protozoa simultaneous assay kit and preparation method thereof
A technology for detection kits and water sources, which is used in biochemical equipment and methods, microbial determination/inspection, resistance to vector-borne diseases, etc. To solve problems such as cysts or small cysts, to achieve the effect of improving sensitivity, accurate and objective judgment, and strong specificity
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Embodiment 1
[0057] 1. Design of primers and probes for multiplex rapid fluorescent quantitative PCR detection kit
[0058] The specific diagnostic genes of Giardia lamblia, Cryptosporidium parvum and Toxoplasma gondii were compared and selected in GeneBank as beta-giardin gene, TRAP-C2 gene and B1 gene, respectively.
[0059] According to the selected specific gene biological software Beacon Designer-v7.5, multiple fluorescent quantitative PCR primers and probes were designed as follows:
[0060] Giardia lamblia:
[0061] Ga: 5'-GGCATCTTCATTCATAGACCTTCTG-3'
[0062] Gs: 5'-ATATGCTGACATCTGGAGGAAAATC-3'
[0063] G-probe: 5'-FAM-TCTTCCGTCTCGCCGTAACTGGTAA-BHQ1-3'
[0064] Cryptosporidium parvum:
[0065] Ca: 5'-ATTGAAATAGATTCTGGTCCTTTGG-3'
[0066] Cs: 5'-CATATTCCCTGTCCCTTGAGTTG-3'
[0067] C-probe: 5'-JOE-CCGACCTCTCTCTCATTTGGTGACC-BHQ1-3'
[0068] Toxoplasma gondii:
[0069] Ta: 5'-ATTTGCCAGCGGGAAATACAG-3'
[0070] Ts: 5'-CCACAAGACGGCTGAAGAATG-3'
[0071] T-probe: 5'-Cy5-TTCTTGTG...
experiment example 1
[0088] Experimental example 1. Specificity experiment of multiplex fluorescent quantitative PCR detection system
[0089] The DNA of 10 negative control samples such as Eimeria, Cryptosporidium ansei, Trichinella, Trichomonas, Escherichia coli, Shigella, Staphylococcus aureus, Clostridium botulinum, Bacillus cholerae, and Salmonella was taken as Templates were detected with the established amplification system. see figure 2 .
[0090] The results showed that none of the control samples met the genus-specific detection criteria.
experiment example 2
[0092] Sensitivity experiment of multiplex fluorescent quantitative PCR detection system
[0093] The extracted total nucleic acids of Giardia lamblia, Cryptosporidium parvum and Toxoplasma gondii were quantified on a nucleic acid analyzer, and the concentrations were diluted to 1ng, 100pg, 10pg, 1pg, 100fg, 10fg, 1fg. Multiple fluorescent quantitative PCR detection was carried out, and a negative control was set at the same time. The results show that the detection threshold of Giardia lamblia is 100fg, the detection threshold of Cryptosporidium parvum is 10fg, and the detection threshold of Toxoplasma gondii is 10fg, all of which belong to high sensitivity detection methods and meet the sensitivity detection standards, see image 3 .
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