Recombinant lentivirus-based vector for implementing RNA (Ribose Nucleic Acid) interference aiming at FLG (filaggrin) gene and preparation of recombinant lentivirus-based vector
A recombinant lentivirus, RNA interference technology, applied in the field of molecular biology, can solve the problem that non-viral vectors cannot meet the long-term expression and other problems
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Embodiment 1
[0072] Example 1: Construction of lentiviral vector for gene FLG
[0073] 1. Design and synthesis of oligonucleotides
[0074] Using Invitrogen's online RNAi series design software BLOCK-iT RNAi Designer, design 3 interference target sequences (see the table below) for the FLG gene mRNA sequence (NM-002016.1), and synthesize the corresponding double-stranded DNA (Shanghai Sangon Biotechnology Co., Ltd. Engineering Technology Services Ltd). The loop structure in the LV3-shRNA template uses TTCAAGAGA to avoid the formation of termination signals. GATCC was added to the 5' end of the sense strand template, which was complementary to the sticky end formed after digestion with BamHI; AATTC was added to the 5' end of the antisense strand template, which was complementary to the sticky end formed after EcoRI digestion.
[0075] serial code
sequence name
target sequence
C721
FLG-homo-274
GTTGGCTCAAGCATATTATTT
C722
FLG-homo-769
CACCA...
Embodiment 2
[0114] Example 2: Coating of FLG gene RNA interference recombinant lentivirus
[0115] Take the recombinant virus plasmid PGLV / H1 / GFP-sh FLG (20 μg) prepared by high-purity endotoxin-free extraction, helper plasmids pHelper1.0 (15 μg) and pHelper 2.0 (10 μg), and carry out co-production according to the instructions of Invitrogen Company Lipofectamine 2000. Transfect 293T cells.
[0116] 8 hours after transfection, replace with complete medium, at 37°C, 5% CO 2 After continuing to culture in the incubator for 48 hours, the cell supernatant rich in lentiviral particles was collected. Centrifuge at 4000g for 10 minutes at 4°C to remove cell debris and filter the supernatant with a 0.45 μM filter to obtain lentivirus for use, which can meet general cell experiments. If you want to obtain a higher concentration of lentivirus, you can further concentrate and purify it to obtain a high-titer lentivirus concentrate. Pack the virus concentrate and store it at -80°C for a long time. ...
Embodiment 3
[0127] Example 3: Target cell invasion test and gene expression inhibition effect analysis
[0128] 1. Target cell invasion test
[0129] Carry out the virus infection experiment on human normal skin cells HACAT according to the following steps:
[0130] 1) When HACAT cells are cultured to 80-90% confluence in a 10 cm culture dish, the culture medium is poured off, and the cells are washed twice with 3 ml of D-Hank's solution.
[0131] 2) Add 1ml of Trypsin-EDTA solution (0.05%, Gibco), mix well, carefully suck off the trypsin solution, and place it at 37°C for 3-5 minutes.
[0132] 3) Add 2ml of DMEM culture medium and pipette to make the cells form a single-cell suspension.
[0133] 4) Count on a blood cell counting board, according to 10×10 5 Inoculate a 6-well plate at the concentration of cells / well and mix well at 37°C 5% CO 2 Incubate for 24 hours.
[0134] 5) Dilute 200 ul of lentivirus stock solution five times with 10% FBS DMEM culture solution.
[0135] 6) Asp...
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