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Molecular identification method of HMGR gene mRNA in pear stock-scion transfer

A technology for molecular identification and gene transfer, applied in DNA/RNA fragments, genetic engineering, plant genetic improvement, etc., can solve problems such as high cost, time-consuming, and differences, and achieve high accuracy

Active Publication Date: 2017-12-12
CHINA AGRI UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

At present, endogenous mRNA molecules that can be transmitted over long distances have been identified in fruit trees, including apple endogenous GAI (Xu et al., 2010), pear endogenous KN1 (Zhang Wenna, 2012), GAI (Zhang et al., 2012), NACP (Zhang et al., 2013), for the method of identifying whether the mRNA of herbaceous plant genes can be transmitted over a long distance, at present, only by constructing a vector carrying a specific tag for detection after transgene grafting (Haywood et al., 2005 ), microinjection detection of specific molecular probes on mRNA markers (Xoconostle-Cazares et al., 1999) and nested RT-PCR (Kanehira et al., 2010) and other techniques, although these techniques detect gene transmissibility compared Accurate, but the shortcomings are cumbersome process, high cost, high requirements, time-consuming, heavy workload, long working cycle, low efficiency, etc., which are difficult for general laboratories to complete
For perennial woody plants, RT-PCR-CAPS (Xu et al., 2010) is a relatively convenient method for studying the transfer of mRNA between rootstock and ear, but this method still has its shortcomings. The requirement for the gene sequence is high. For the mRNA that needs to be identified, there are natural differences in the gene sequence between the root and ear, and the general gene is difficult to meet the problem. Therefore, in the process of studying the transfer of mRNA between the root and ear, Its strict requirements greatly limit the number of mRNAs that can be identified, which makes it more difficult to carry out research on the grafting and transfer of endogenous mRNA in fruit trees, making it difficult to advance research on the long-distance transfer of mRNA in fruit trees. New long-distance transfer endogenous mRNA difficult to find

Method used

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  • Molecular identification method of HMGR gene mRNA in pear stock-scion transfer
  • Molecular identification method of HMGR gene mRNA in pear stock-scion transfer
  • Molecular identification method of HMGR gene mRNA in pear stock-scion transfer

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0039] Embodiment 1 test tube micro-grafting

[0040] Select rootstock Pyrus betulaefolia Bunge and scion pear (Pyrusbretschneideri) tissue culture seedling young leaves, constant light source, light intensity 1500lx, light cycle 14h / 10h day and night, room temperature 23~25℃, relative humidity 85%, 30~40d Succession once.

[0041] Table 1 Ya pear and Du pear tissue culture medium

[0042]

[0043] After liquid nitrogen treatment, they were stored in a -80°C refrigerator for gene cloning. Under aseptic conditions, remove the head of the pear tissue-cultured seedlings after 30 days of propagation, leave about 1.5cm long stem section as a rootstock, and cut about 0.5cm hole longitudinally along the top; take the Yali tissue-cultured seedlings with a seedling height of 1cm, Leave 2-3 leaves at the top, cut the base into a "V" shape, insert it into the cut of the rootstock, wrap it with tin foil and fix it, and put it into the medium MS+0.5mg·L –1 6-BA+0.1mg·L –1 Grown in ...

Embodiment 2

[0044] Example 2 Gene RNA Extraction

[0045] Total RNA was extracted from plant materials using the CTAB method (Zhang Yugang et al., 2005). Total RNA was extracted from the leaves and stems of Du pears, Ya pears, rootstocks and scions after grafting, dissolved in 30 μL DEPC water, and placed at -80 for electrophoresis detection. ℃ refrigerator for future use.

[0046] (1) Remove DNA from RNA:

[0047] Add ingredients and reaction system as follows:

[0048]

[0049] (2) Treat at 37°C for 30 minutes; add 550 μL RNase-free water (treated with 0.1% DEPC), then add an equal volume of 600 μL CI and mix well;

[0050] (3) Centrifuge at 10000rpm for 10min at 4°C, absorb the supernatant, then add an equal volume of CI and mix gently; centrifuge at 10000rpm for 10min at 4°C;

[0051] (4) Aspirate the supernatant, add 2 times the volume of absolute ethanol to the tube, and precipitate at -20°C for 1 hour;

[0052] (5) Centrifuge at 12000rpm for 20min at 4°C; discard the superna...

Embodiment 3

[0055] Example 3 reverse transcription of RNA into cDNA

[0056] The reverse transcription system and procedures are as follows:

[0057] (1) Add the following components to a 0.2mL RNase-free PCR tube on ice:

[0058]

[0059] (2) Centrifuge briefly after mixing, put in a PCR instrument at 70°C for 10 minutes, and then immediately put it on ice for 5 minutes;

[0060] (3) Continue to add the following components to the PCR tube in the previous step on ice:

[0061]

[0062] (4) Instantaneous centrifugation after mixing, put into a PCR machine at 42°C for 60 minutes, and 70°C for 10 minutes. After the reaction is completed, take out the product and store it at -20°C for later use. The obtained cDNA was used as a template for PCR amplification described below.

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Abstract

The invention discloses a molecular identification method of HMGR gene mRNA in pear stock-scion transfer. The molecular identification method comprises the following steps: (1) by taking pyrus bretschneideri rehd as scion and pyrus betulifolia bunge as stock, carrying out micro grafting of test-tube seedlings; (2) extracting total RNA of pyrus bretschneideri rehd, pyrus betulifolia bunge and grafted stock and scion, carrying out reverse transcription to obtain cDNA, carrying out PCR amplification on the total length of the HMGR gene, and carrying out second-time PCR by adopting the amplification result as a template, thus obtaining respective HMGR gene fragments, wherein the sequences of upstream and downstream primers obtained through two times of PCR are respectively shown as SEQ ID NO.1-4; and (3) carrying out enzyme digestion on the PCR product obtained for the second time by adopting restriction endonuclease, and comparing enzyme digestion spectrograms before and after grafting for identifying the transfer condition. The method provided by the invention is rapid and sensitive, is high in accuracy, is simple and convenient, and can be applied to other pear plants.

Description

technical field [0001] The invention relates to the field of plant molecular biology, in particular to a molecular identification method for the long-distance transfer of HMGR gene mRNA molecules between rootstocks and scions of the genus Pyrus. Background technique [0002] In the practice of horticultural crop production, the application of grafting technology can improve plant resistance, increase yield, and improve fruit quality. used widely. In the production of fruit trees, it is found that different rootstocks can have different effects on the physiological and biochemical characteristics of the scion, flowering and fruiting, environmental adaptability, and tree growth and development, and these effects will eventually affect the formation of fruit and the later economic value. to a crucial role. [0003] So far, it has been found that there are many endogenous mRNA molecules that are transmitted long-distance through the plant phloem between the rootstock and the s...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N15/53C12Q1/68C12N15/11
CPCC12N9/0006C12Q1/683C12Q1/6895C12Q2600/13C12Q2600/156C12Y101/01034C12Q2565/125
Inventor 李天忠郝理王胜男王圣元
Owner CHINA AGRI UNIV
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