Method for detecting three kinds of urogenital canal mycoplasma by loop-mediated isothermal amplification technology
A technology for mycoplasma genitalium and genitourinary tract, applied in the direction of microorganism-based methods, biochemical equipment and methods, recombinant DNA technology, etc., can solve problems such as false negatives, long detection time, LAMP special primers and kits, etc.
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Embodiment 1
[0053] Example 1, Primer Design for LAMP Detection of UU, MG and MH
[0054] UU, MG and MH-specific conserved target sequences were retrieved from the American Gene Database (NCBI GenBank AccessionM36190.1; NCBI GenBank NR_074611.1; NCBI GenBank AJ243692.1), and the online primer design software PrimerExplorerV4 was used to upload the target sequence. Several sets of primer sequences were preliminarily obtained. According to the key factors of LAMP primer design, mainly including the stability of the primer end, GC content, the distance between the primers and the secondary structure, the final LAMP primers, UU, MG and MH primer sequences are shown in Table 1. , 2 and 3 (see the content of the invention for details).
Embodiment 2
[0055] Embodiment 2, the establishment of the LAMP detection method of UU, MG and MH of the present invention
[0056] Use the primers obtained in Example 1 for LAMP detection of UU, MG and MH to perform LAMP detection on urogenital specimens to obtain the best reaction system and reaction conditions. The specific steps are as follows:
[0057] 1. Determination of the best response system
[0058] Under the same reaction conditions (60min at 63°C), the optimal reaction system contains the following components:
[0059] [1] Reaction system
[0060] After the nucleic acid in the sample to be tested was extracted using the Genomic DNA Extraction Kit of Tienensis Bacteria, the genomic DNA containing UU, MG or MH was used as a template, and the isothermal amplification was carried out under the guidance of the special primers for LAMP obtained in Example 1. Among them, the 25 μl LAMP reaction system includes: 2 μl of genomic DNA containing UU, MG or MH, 20 mM Tris HCl (pH 8.8), 1...
Embodiment 3
[0067] Example 3, the specificity and sensitivity of the LAMP detection method of UU, MG and MH of the present invention
[0068] One, the specificity of the LAMP detection method of goose parvovirus of the present invention
[0069] Using the common human urogenital tract pathogens Enterobacter cloacae, Neisseria gonorrhoeae, Chlamydia trachomatis, Candida albicans, herpes simplex virus and Escherichia coli genomic DNA as templates, and nucleic acid-free water as a negative control, detection example 2 The specificity of the best LAMP detection method obtained, the reaction system and reaction conditions are the same as in Example 2. The specific detection results of the LAMP detection method of UU, MG and MH of the present invention are as follows image 3 As shown, the results did not detect Enterobacter cloacae, Neisseria gonorrhoeae, Chlamydia trachomatis, Candida albicans, herpes simplex virus or Escherichia coli, suggesting that the LAMP detection method of UU, MG and ...
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