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MTRR gene polymorphism detection probe, primer, kit and detection method

A technology of gene polymorphism and detection kit, which is applied in biochemical equipment and methods, measurement/testing of microorganisms, DNA/RNA fragments, etc., can solve the problems of less fluorescent PCR equipment, high difficulty and high cost, and achieve the best results The effect of clear interpretation, low cost and easy operation

Inactive Publication Date: 2018-08-28
深圳会众生物技术有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, this method has the defects of long time-consuming, high risk of contamination and poor specificity; (6) Mutation amplification retardation PCR (AMRS): also known as allele-specific amplification method, using the 3` terminal position of PCR primers The principle that the base must be complementary to its template DNA can be effectively amplified. Design allele-specific amplification primers. Only when the primer 3` base is paired with the template can the amplification band appear, thereby detecting mutations
This method needs to strictly control the reaction conditions, and the multiplex PCR amplification is more difficult, thus limiting the clinical application
[0008] In the prior art, the Chinese patent application with publication number 106957903A discloses a genotyping kit for detecting polymorphic sites of key enzymes in folic acid metabolism and its detection method, which uses the fluorescence melting curve method to detect gene sites including MTHFR:C677T, MTHFR:A1298C, and MTRR:A66G; specifically, it is designed with 3 probes to detect 3 mutation sites respectively, the number of probes is large, the cost is high, multi-channel fluorescence detection is required, and the TM value Affected by the detection sequence of the probe, the design and detection effect are not good
[0009] The Chinese patent application with publication number 106701987A discloses a PCR amplification system and detection kit for genotyping three SNP loci related to human folic acid metabolism, which uses the AMRS-PCR method to detect gene loci including MTHFR:C677T , MTHFR:A1298C and MTRR:A66G; the specificity of the above-mentioned detection scheme is poor, the requirement for the ion level in the system is high, and the DNA purity is greatly affected, so it is not suitable for clinical application
[0010] The Chinese patent application with the publication number 107254520A discloses a detection method for genes related to folic acid metabolism, which adopts Sanger sequencing method, and detects gene loci including MTHFR:C677T, MTHFR:A1298C and MTRR:A66G; the above-mentioned detection scheme is cumbersome to operate, and Pollution from opening the cap
[0011] The Chinese patent application with publication number 104131087A discloses a kit for genotyping folic acid metabolism genes, which uses the reverse dot hybridization method to detect gene loci including MTHFR:C677T, MTHFR:A1298C and MTRR:A66G; the above The detection scheme is cumbersome, time-consuming, and has poor specificity
[0012] The Chinese patent application with the publication number 107058530A discloses a kit for direct detection of folic acid drug-sensitive genes in blood and its use method, which uses fluorescent PCR method, and the detection gene loci include MTHFR:C677T and MTHFR:A1298C; the above The detection scheme requires multiple probes and requires many channels, and there are few suitable fluorescent PCR equipment, which is not suitable for clinical promotion

Method used

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  • MTRR gene polymorphism detection probe, primer, kit and detection method
  • MTRR gene polymorphism detection probe, primer, kit and detection method
  • MTRR gene polymorphism detection probe, primer, kit and detection method

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Effect test

Embodiment 1

[0059] Adopt test kit of the present invention to the detection situation of clinical sample:

[0060] Use the kit of the present invention to detect 300 cases of clinical samples, and the test results of the kit of the present invention to detect clinical samples are shown in Table 4 below.

[0061] Table 4

[0062]

[0063] The test kit of the present invention compares the detection results of 300 clinical samples with the sequencing results. The positive coincidence rate and negative coincidence rate are both 100%, and the accuracy rate reaches 100%. .

[0064] table 5

[0065]

[0066] Note: Positive in the sequencing results refers to positive genotypes within the detection range of the kit of the present invention, and negative refers to positive or negative samples of other genotypes outside the detection range of the kit of the present invention.

[0067] The performance index of this product:

[0068] (1) Measurement accuracy

[0069] To study the accuracy...

Embodiment 2

[0080] Clinical application of kit of the present invention

[0081] 1. Intended use

[0082] This kit is used for the qualitative detection of human whole blood genomic DNA samples in vitro, and can detect the genotype of a common folic acid metabolism gene in Chinese, as shown in Table 6 below:

[0083] Table 6

[0084]

[0085] 2. Inspection principle

[0086] This kit product adopts multiplex PCR combined with multicolor fluorescent probe melting curve analysis technology.

[0087] Multiplex PCR: According to the MTHFR and MTRR gene information published on NCBI, referring to domestic major research papers on folic acid metabolism genotyping, select the common gene locus MTRR A66G in the domestic population, and design highly specific genes according to the gene sequence characteristics of each locus. The primers and multicolor fluorescent probes are used for multiplex fluorescent PCR detection in a single tube. At the same time, the ACTB gene on human genomic DNA w...

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Abstract

The invention relates to an MTRR gene polymorphism detection probe, a primer, a kit and a detection method. The MMRR gene polymorphism detection probe comprises a probe T1 used for detecting the A66Gsite of the MTRR gene, and the nucleotide sequence of the probe is shown in SEQ ID No. 1. The MMRR gene polymorphism detection probe, the primer and the kit have the advantages of non-invasive sampling, no DNA extraction, low cost, high efficiency, accuracy, simple and convenient operation, clear result interpretation and easy clinical popularization.

Description

technical field [0001] The invention relates to gene detection technology, in particular to a detection probe, primer, kit and detection method for MTRR gene polymorphism. Background technique [0002] Folic acid belongs to B vitamins. It is an essential element for the synthesis of nucleic acid, a substance necessary for cell growth and tissue repair, and an indispensable nutrient during embryonic development. Folic acid deficiency is one of the main causes of birth defects. Folic acid deficiency Mostly caused by genetic defects, the body's metabolism of folic acid is impaired. [0003] Folate plays an important role in the homocysteine ​​metabolic pathway. Folic acid acts in the form of tetrahydrofolate in the body. If folic acid is deficient and the synthesis of N5-methyltetrahydrofolate is insufficient, the conversion of homocysteine ​​to methionine will be impaired, and high concentrations of homocysteine ​​will occur. Amino acid can damage the endothelial cells of bl...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6883C12Q1/6858C12N15/11
CPCC12Q1/6858C12Q1/6883C12Q2600/156C12Q2600/16C12Q2563/107C12Q2537/143C12Q2531/113C12Q2527/107
Inventor 刘晶晶
Owner 深圳会众生物技术有限公司
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