Primer for detecting CPT2 F532C mutation, kit and system for screening severe case EV71 vulnerable child patients
An EV71 and kit technology, applied in the field of biomedicine, can solve the problems of reduced ATP production, blood-brain barrier endothelial cell damage, and aggravated brain damage, so as to reduce disability and mortality, and reduce severe encephalitis and encephalopathy. Occurrence, efficacy of individualized diagnosis and treatment
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Embodiment 1
[0158] The effect of CPT2 F352C mutation on ATP level and CPT2 enzyme activity was studied at the astrocyte level.
[0159] (1) Construction of CPT2 F352C mutant astrocyte model:
[0160] The CPT2 F352C point mutation astrocyte model was constructed by CRISPR / Cas9 technology. Through electroporation of Cas9-CPT2 sgRNA plasmid and donor plasmid, the sequence near the target site on the genome is specifically cut by cas9 and repaired by homologous recombination under the guidance of the template donor plasmid, thereby introducing the mutation site. Compared with virus-mediated gene knockout, the advantage of plasmid electroporation is that there will be no random insertion of the genome. The specific route is as follows:
[0161] S1: For the CPT2 gene, according to the principle of being as close to the editing target as possible, design the guide RNA sequence of the genome of the target site, as shown in SEQ ID NO.3, and perform in vitro transcription to obtain the guide RNA;...
Embodiment 2
[0170] To study the effect of CPT2 F352C mutation-induced dysfunction on severe EV71 infection in mice.
[0171] By comparing human and mouse CPT2 sequences with the NCBI database, it was found that both human (NP-00089) and mouse (NP-034079.2) CPT2 proteins have 658 amino acids, and 94% of their amino acid sequences are identical At the same time, it is confirmed that the amino acid at position 352 in mice is the same as that in humans. Phenylalanine (F) is located in the structure of Choline / Carnitine o-acyltransferase (Choline / Carnitine o-acyltransferase), which may inhibit the enzyme of CPT2. activity plays an important role.
[0172] (1) Construction of CPT2 F352C mutant mice
[0173] 1) Guide-RNA site and Oligo Donor DNA design and synthesis
[0174] S1: Use Zhang Lab's online design software for guide-RNA design: use http: / / crispr.mit.edu / to design a guide-RNA targeting the 4th exon of CPT2, marked as gRNA1, and the sequence is as SEQ ID NO. 4, the guide-RNA sequenc...
Embodiment 3
[0281] Validation at the human level using PBMCs from patients with CPT2 F352C mutation
[0282] (1) Collect blood samples from healthy people and blood samples from children infected with EV71. All patients gave informed consent. All the above-mentioned samples were obtained with the consent of the organizational ethics committee.
[0283] (2) ATP level and CPT2 enzyme activity were compared after PBMC of EV71-infected children with CPT2 F352C mutation and children without CPT2 F352C mutation. CPT2 F352C mutation children and non-mutation children's PBMCs were cultured at high temperature for 2 h after EV71 infection. Compared with those without mutation, CPT2 enzyme activity and ATP levels were significantly reduced at high temperature, and the difference was statistically significant.
[0284] Affiliated Hospital of Qingdao University
[0285] Primers, kits for detection of CPT2 F532C mutation and system for screening severe EV71 susceptible children
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